Gene : Phvul.004G072500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31529:SF4 - LOB DOMAIN-CONTAINING PROTEIN 14-RELATED Genomic Order:  760
Name:  ? Phvul.004G072500 Secondary Identifier:  ? PAC:37162665
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G072500 0.5kb upstream 0.5kb upstream 3800 true Chr04: 11769566-11773365 Phaseolus vulgaris
Phvul.004G072500 0.5kb upstream 0.5kb upstream 500 false Chr04: 11772866-11773365 Phaseolus vulgaris
Phvul.004G072500 0.5kb downstream 0.5kb downstream 3800 true Chr04: 11769066-11772865 Phaseolus vulgaris
Phvul.004G072500 0.5kb downstream 0.5kb downstream 500 false Chr04: 11769066-11769565 Phaseolus vulgaris
Phvul.004G072500 1.0kb upstream 1.0kb upstream 4300 true Chr04: 11769566-11773865 Phaseolus vulgaris
Phvul.004G072500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 11772866-11773865 Phaseolus vulgaris
Phvul.004G072500 1.0kb downstream 1.0kb downstream 4300 true Chr04: 11768566-11772865 Phaseolus vulgaris
Phvul.004G072500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 11768566-11769565 Phaseolus vulgaris
Phvul.004G072500 2.0kb upstream 2.0kb upstream 5300 true Chr04: 11769566-11774865 Phaseolus vulgaris
Phvul.004G072500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 11772866-11774865 Phaseolus vulgaris
Phvul.004G072500 2.0kb downstream 2.0kb downstream 5300 true Chr04: 11767566-11772865 Phaseolus vulgaris
Phvul.004G072500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 11767566-11769565 Phaseolus vulgaris
Phvul.004G072500 5.0kb upstream 5.0kb upstream 8300 true Chr04: 11769566-11777865 Phaseolus vulgaris
Phvul.004G072500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 11772866-11777865 Phaseolus vulgaris
Phvul.004G072500 5.0kb downstream 5.0kb downstream 8300 true Chr04: 11764566-11772865 Phaseolus vulgaris
Phvul.004G072500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 11764566-11769565 Phaseolus vulgaris
Phvul.004G072500 10.0kb upstream 10.0kb upstream 13300 true Chr04: 11769566-11782865 Phaseolus vulgaris
Phvul.004G072500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 11772866-11782865 Phaseolus vulgaris
Phvul.004G072500 10.0kb downstream 10.0kb downstream 13300 true Chr04: 11759566-11772865 Phaseolus vulgaris
Phvul.004G072500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 11759566-11769565 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308548 5265 Fabidae View MSA
124063003 5270 Rosid View MSA
123738630 5271 Pentapetalae View MSA
122788179 5272 Eudicot View MSA
122045879 5273 Angiosperm View MSA
121351593 5274 Embryophyte View MSA
123382239 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.093311 0.0 0.432572 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0877346 0.0 0.407539 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0427808 0.0 0.21661 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain