Gene : Phvul.007G008000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11178:SF1 - NFU1 IRON-SULFUR CLUSTER SCAFFOLD HOMOLOG, MITOCHONDRIAL Genomic Order:  77
Name:  ? Phvul.007G008000 Secondary Identifier:  ? PAC:37166342
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G008000 0.5kb upstream 0.5kb upstream 4208 true Chr07: 573537-577744 Phaseolus vulgaris
Phvul.007G008000 0.5kb upstream 0.5kb upstream 500 false Chr07: 573537-574036 Phaseolus vulgaris
Phvul.007G008000 0.5kb downstream 0.5kb downstream 4208 true Chr07: 574037-578244 Phaseolus vulgaris
Phvul.007G008000 0.5kb downstream 0.5kb downstream 500 false Chr07: 577745-578244 Phaseolus vulgaris
Phvul.007G008000 1.0kb upstream 1.0kb upstream 4708 true Chr07: 573037-577744 Phaseolus vulgaris
Phvul.007G008000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 573037-574036 Phaseolus vulgaris
Phvul.007G008000 1.0kb downstream 1.0kb downstream 4708 true Chr07: 574037-578744 Phaseolus vulgaris
Phvul.007G008000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 577745-578744 Phaseolus vulgaris
Phvul.007G008000 2.0kb upstream 2.0kb upstream 5708 true Chr07: 572037-577744 Phaseolus vulgaris
Phvul.007G008000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 572037-574036 Phaseolus vulgaris
Phvul.007G008000 2.0kb downstream 2.0kb downstream 5708 true Chr07: 574037-579744 Phaseolus vulgaris
Phvul.007G008000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 577745-579744 Phaseolus vulgaris
Phvul.007G008000 5.0kb upstream 5.0kb upstream 8708 true Chr07: 569037-577744 Phaseolus vulgaris
Phvul.007G008000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 569037-574036 Phaseolus vulgaris
Phvul.007G008000 5.0kb downstream 5.0kb downstream 8708 true Chr07: 574037-582744 Phaseolus vulgaris
Phvul.007G008000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 577745-582744 Phaseolus vulgaris
Phvul.007G008000 10.0kb upstream 10.0kb upstream 13708 true Chr07: 564037-577744 Phaseolus vulgaris
Phvul.007G008000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 564037-574036 Phaseolus vulgaris
Phvul.007G008000 10.0kb downstream 10.0kb downstream 13708 true Chr07: 574037-587744 Phaseolus vulgaris
Phvul.007G008000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 577745-587744 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300319 5265 Fabidae View MSA
124067636 5270 Rosid View MSA
123740613 5271 Pentapetalae View MSA
122791605 5272 Eudicot View MSA
122043345 5273 Angiosperm View MSA
121344774 5274 Embryophyte View MSA
123425135 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.5766 0.0 51.0525    
cufflinks 19.0031 0.0 49.684    
cufflinks 17.2349 0.0 45.3148    
cufflinks 31.63 0.0 81.758   High
cufflinks 18.592 0.0 48.7005    
cufflinks 12.7863 0.0 34.2997   Low
cufflinks 13.4577 0.0 35.9288   Low
cufflinks 16.4841 0.0 43.4077    
cufflinks 18.9218 0.0 49.4888    
cufflinks 18.2401 0.0 47.7887    
cufflinks 19.0364 0.0 49.8133    

0 Strain