Gene : Phvul.004G063000 P. vulgaris v2.1
Defline:  (1 of 2) PF11016 - Protein of unknown function (DUF2854) (DUF2854) Genomic Order:  662
Name:  ? Phvul.004G063000 Secondary Identifier:  ? PAC:37163190
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G063000 0.5kb upstream 0.5kb upstream 13641 true Chr04: 8833005-8846645 Phaseolus vulgaris
Phvul.004G063000 0.5kb upstream 0.5kb upstream 500 false Chr04: 8833005-8833504 Phaseolus vulgaris
Phvul.004G063000 0.5kb downstream 0.5kb downstream 13641 true Chr04: 8833505-8847145 Phaseolus vulgaris
Phvul.004G063000 0.5kb downstream 0.5kb downstream 500 false Chr04: 8846646-8847145 Phaseolus vulgaris
Phvul.004G063000 1.0kb upstream 1.0kb upstream 14141 true Chr04: 8832505-8846645 Phaseolus vulgaris
Phvul.004G063000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 8832505-8833504 Phaseolus vulgaris
Phvul.004G063000 1.0kb downstream 1.0kb downstream 14141 true Chr04: 8833505-8847645 Phaseolus vulgaris
Phvul.004G063000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 8846646-8847645 Phaseolus vulgaris
Phvul.004G063000 2.0kb upstream 2.0kb upstream 15141 true Chr04: 8831505-8846645 Phaseolus vulgaris
Phvul.004G063000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 8831505-8833504 Phaseolus vulgaris
Phvul.004G063000 2.0kb downstream 2.0kb downstream 15141 true Chr04: 8833505-8848645 Phaseolus vulgaris
Phvul.004G063000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 8846646-8848645 Phaseolus vulgaris
Phvul.004G063000 5.0kb upstream 5.0kb upstream 18141 true Chr04: 8828505-8846645 Phaseolus vulgaris
Phvul.004G063000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 8828505-8833504 Phaseolus vulgaris
Phvul.004G063000 5.0kb downstream 5.0kb downstream 18141 true Chr04: 8833505-8851645 Phaseolus vulgaris
Phvul.004G063000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 8846646-8851645 Phaseolus vulgaris
Phvul.004G063000 10.0kb upstream 10.0kb upstream 23141 true Chr04: 8823505-8846645 Phaseolus vulgaris
Phvul.004G063000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 8823505-8833504 Phaseolus vulgaris
Phvul.004G063000 10.0kb downstream 10.0kb downstream 23141 true Chr04: 8833505-8856645 Phaseolus vulgaris
Phvul.004G063000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 8846646-8856645 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300017 5265 Fabidae View MSA
124061682 5270 Rosid View MSA
123746041 5271 Pentapetalae View MSA
122789084 5272 Eudicot View MSA
122043202 5273 Angiosperm View MSA
121344662 5274 Embryophyte View MSA
123425067 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 38.0353 0.0 121.109 High  
cufflinks 23.2683 0.0 69.0677    
cufflinks 220.161 0.0 853.279 High High
cufflinks 28.7137 0.0 83.0481    
cufflinks 18.5451 0.0 57.2285    
cufflinks 78.0682 0.0 248.355 High  
cufflinks 1.85272 0.0 7.67741   Low
cufflinks 1.23685 0.0 5.40234   Low
cufflinks 2.22834 0.0 9.11917   Low
cufflinks 26.905 0.0 96.912    
cufflinks 14.8862 0.0 55.3252    

0 Strain