Gene : Phvul.004G063200 P. vulgaris v2.1
Defline:  (1 of 1) PF02791//PF10497 - DDT domain (DDT) // Zinc-finger domain of monoamine-oxidase A repressor R1 (zf-4CXXC_R1) Genomic Order:  664
Name:  ? Phvul.004G063200 Secondary Identifier:  ? PAC:37163599
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G063200 0.5kb upstream 0.5kb upstream 10947 true Chr04: 8908881-8919827 Phaseolus vulgaris
Phvul.004G063200 0.5kb upstream 0.5kb upstream 500 false Chr04: 8919328-8919827 Phaseolus vulgaris
Phvul.004G063200 0.5kb downstream 0.5kb downstream 10947 true Chr04: 8908381-8919327 Phaseolus vulgaris
Phvul.004G063200 0.5kb downstream 0.5kb downstream 500 false Chr04: 8908381-8908880 Phaseolus vulgaris
Phvul.004G063200 1.0kb upstream 1.0kb upstream 11447 true Chr04: 8908881-8920327 Phaseolus vulgaris
Phvul.004G063200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 8919328-8920327 Phaseolus vulgaris
Phvul.004G063200 1.0kb downstream 1.0kb downstream 11447 true Chr04: 8907881-8919327 Phaseolus vulgaris
Phvul.004G063200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 8907881-8908880 Phaseolus vulgaris
Phvul.004G063200 2.0kb upstream 2.0kb upstream 12447 true Chr04: 8908881-8921327 Phaseolus vulgaris
Phvul.004G063200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 8919328-8921327 Phaseolus vulgaris
Phvul.004G063200 2.0kb downstream 2.0kb downstream 12447 true Chr04: 8906881-8919327 Phaseolus vulgaris
Phvul.004G063200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 8906881-8908880 Phaseolus vulgaris
Phvul.004G063200 5.0kb upstream 5.0kb upstream 15447 true Chr04: 8908881-8924327 Phaseolus vulgaris
Phvul.004G063200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 8919328-8924327 Phaseolus vulgaris
Phvul.004G063200 5.0kb downstream 5.0kb downstream 15447 true Chr04: 8903881-8919327 Phaseolus vulgaris
Phvul.004G063200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 8903881-8908880 Phaseolus vulgaris
Phvul.004G063200 10.0kb upstream 10.0kb upstream 20447 true Chr04: 8908881-8929327 Phaseolus vulgaris
Phvul.004G063200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 8919328-8929327 Phaseolus vulgaris
Phvul.004G063200 10.0kb downstream 10.0kb downstream 20447 true Chr04: 8898881-8919327 Phaseolus vulgaris
Phvul.004G063200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 8898881-8908880 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312534 5265 Fabidae View MSA
124072248 5270 Rosid View MSA
123741125 5271 Pentapetalae View MSA
122796203 5272 Eudicot View MSA
122042445 5273 Angiosperm View MSA
121349857 5274 Embryophyte View MSA
123427562 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.5224 0.0 10.5789   Low
cufflinks 1.81164 0.0 10.9903   Low
cufflinks 4.66709 0.0 23.35   High
cufflinks 1.61241 0.0 10.1932   Low
cufflinks 2.65242 0.0 14.5687    
cufflinks 3.6155 0.0 23.5255    
cufflinks 3.60261 0.0 23.7586    
cufflinks 4.67491 0.0 25.1345   High
cufflinks 3.33279 0.0 20.4388    
cufflinks 5.71389 0.0 34.1982   High
cufflinks 1.92588 0.0 12.5819    

0 Strain