Gene : Phvul.007G006700 P. vulgaris v2.1
Defline:  (1 of 1) K02257 - protoheme IX farnesyltransferase (COX10) Genomic Order:  64
Name:  ? Phvul.007G006700 Secondary Identifier:  ? PAC:37166785
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G006700 0.5kb upstream 0.5kb upstream 5538 true Chr07: 486912-492449 Phaseolus vulgaris
Phvul.007G006700 0.5kb upstream 0.5kb upstream 500 false Chr07: 486912-487411 Phaseolus vulgaris
Phvul.007G006700 0.5kb downstream 0.5kb downstream 5538 true Chr07: 487412-492949 Phaseolus vulgaris
Phvul.007G006700 0.5kb downstream 0.5kb downstream 500 false Chr07: 492450-492949 Phaseolus vulgaris
Phvul.007G006700 1.0kb upstream 1.0kb upstream 6038 true Chr07: 486412-492449 Phaseolus vulgaris
Phvul.007G006700 1.0kb upstream 1.0kb upstream 1000 false Chr07: 486412-487411 Phaseolus vulgaris
Phvul.007G006700 1.0kb downstream 1.0kb downstream 6038 true Chr07: 487412-493449 Phaseolus vulgaris
Phvul.007G006700 1.0kb downstream 1.0kb downstream 1000 false Chr07: 492450-493449 Phaseolus vulgaris
Phvul.007G006700 2.0kb upstream 2.0kb upstream 7038 true Chr07: 485412-492449 Phaseolus vulgaris
Phvul.007G006700 2.0kb upstream 2.0kb upstream 2000 false Chr07: 485412-487411 Phaseolus vulgaris
Phvul.007G006700 2.0kb downstream 2.0kb downstream 7038 true Chr07: 487412-494449 Phaseolus vulgaris
Phvul.007G006700 2.0kb downstream 2.0kb downstream 2000 false Chr07: 492450-494449 Phaseolus vulgaris
Phvul.007G006700 5.0kb upstream 5.0kb upstream 10038 true Chr07: 482412-492449 Phaseolus vulgaris
Phvul.007G006700 5.0kb upstream 5.0kb upstream 5000 false Chr07: 482412-487411 Phaseolus vulgaris
Phvul.007G006700 5.0kb downstream 5.0kb downstream 10038 true Chr07: 487412-497449 Phaseolus vulgaris
Phvul.007G006700 5.0kb downstream 5.0kb downstream 5000 false Chr07: 492450-497449 Phaseolus vulgaris
Phvul.007G006700 10.0kb upstream 10.0kb upstream 15038 true Chr07: 477412-492449 Phaseolus vulgaris
Phvul.007G006700 10.0kb upstream 10.0kb upstream 10000 false Chr07: 477412-487411 Phaseolus vulgaris
Phvul.007G006700 10.0kb downstream 10.0kb downstream 15038 true Chr07: 487412-502449 Phaseolus vulgaris
Phvul.007G006700 10.0kb downstream 10.0kb downstream 10000 false Chr07: 492450-502449 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315294 5265 Fabidae View MSA
124065893 5270 Rosid View MSA
123737937 5271 Pentapetalae View MSA
122790266 5272 Eudicot View MSA
122046986 5273 Angiosperm View MSA
121346504 5274 Embryophyte View MSA
123428600 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.0257 0.0 42.4973    
cufflinks 13.3822 0.0 36.0174    
cufflinks 16.7459 0.0 44.3143    
cufflinks 22.9985 0.0 59.9196   High
cufflinks 14.6869 0.0 39.3345    
cufflinks 13.5723 0.0 36.5086    
cufflinks 15.4694 0.0 41.2379    
cufflinks 17.7291 0.0 46.7313    
cufflinks 20.7771 0.0 54.4851   High
cufflinks 12.4123 0.0 33.5847   Low
cufflinks 13.2013 0.0 35.6797    

0 Strain