Gene : Phvul.004G061600 P. vulgaris v2.1
Defline:  (1 of 13) PTHR11945:SF176 - PROTEIN AGAMOUS-LIKE 82 Genomic Order:  648
Name:  ? Phvul.004G061600 Secondary Identifier:  ? PAC:37161846
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G061600 0.5kb upstream 0.5kb upstream 1391 true Chr04: 8580172-8581562 Phaseolus vulgaris
Phvul.004G061600 0.5kb upstream 0.5kb upstream 500 false Chr04: 8581063-8581562 Phaseolus vulgaris
Phvul.004G061600 0.5kb downstream 0.5kb downstream 1391 true Chr04: 8579672-8581062 Phaseolus vulgaris
Phvul.004G061600 0.5kb downstream 0.5kb downstream 500 false Chr04: 8579672-8580171 Phaseolus vulgaris
Phvul.004G061600 1.0kb upstream 1.0kb upstream 1891 true Chr04: 8580172-8582062 Phaseolus vulgaris
Phvul.004G061600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 8581063-8582062 Phaseolus vulgaris
Phvul.004G061600 1.0kb downstream 1.0kb downstream 1891 true Chr04: 8579172-8581062 Phaseolus vulgaris
Phvul.004G061600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 8579172-8580171 Phaseolus vulgaris
Phvul.004G061600 2.0kb upstream 2.0kb upstream 2891 true Chr04: 8580172-8583062 Phaseolus vulgaris
Phvul.004G061600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 8581063-8583062 Phaseolus vulgaris
Phvul.004G061600 2.0kb downstream 2.0kb downstream 2891 true Chr04: 8578172-8581062 Phaseolus vulgaris
Phvul.004G061600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 8578172-8580171 Phaseolus vulgaris
Phvul.004G061600 5.0kb upstream 5.0kb upstream 5891 true Chr04: 8580172-8586062 Phaseolus vulgaris
Phvul.004G061600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 8581063-8586062 Phaseolus vulgaris
Phvul.004G061600 5.0kb downstream 5.0kb downstream 5891 true Chr04: 8575172-8581062 Phaseolus vulgaris
Phvul.004G061600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 8575172-8580171 Phaseolus vulgaris
Phvul.004G061600 10.0kb upstream 10.0kb upstream 10891 true Chr04: 8580172-8591062 Phaseolus vulgaris
Phvul.004G061600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 8581063-8591062 Phaseolus vulgaris
Phvul.004G061600 10.0kb downstream 10.0kb downstream 10891 true Chr04: 8570172-8581062 Phaseolus vulgaris
Phvul.004G061600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 8570172-8580171 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296792 5265 Fabidae View MSA
124035785 5270 Rosid View MSA
123746234 5271 Pentapetalae View MSA
122797377 5272 Eudicot View MSA
122048647 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.051475 0.0 0.25511 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.261467 0.0 1.09782 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.191464 0.0 0.838586 Low  
cufflinks 0.200144 0.0 0.863603 Low  
cufflinks 0.177394 0.0 0.776028 Low  
cufflinks 0.363949 0.0 1.48323 Low High
cufflinks 0.0654952 0.0 0.31812 Low Low
cufflinks 0.219619 0.0 0.941149 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain