Gene : Phvul.004G063400 P. vulgaris v2.1
Defline:  (1 of 1) PF02791//PF10497//PF11016 - DDT domain (DDT) // Zinc-finger domain of monoamine-oxidase A repressor R1 (zf-4CXXC_R1) // Protein of unknown function (DUF2854) (DUF2854) Genomic Order:  666
Name:  ? Phvul.004G063400 Secondary Identifier:  ? PAC:37161895
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G063400 0.5kb upstream 0.5kb upstream 11388 true Chr04: 9062525-9073912 Phaseolus vulgaris
Phvul.004G063400 0.5kb upstream 0.5kb upstream 500 false Chr04: 9073413-9073912 Phaseolus vulgaris
Phvul.004G063400 0.5kb downstream 0.5kb downstream 11388 true Chr04: 9062025-9073412 Phaseolus vulgaris
Phvul.004G063400 0.5kb downstream 0.5kb downstream 500 false Chr04: 9062025-9062524 Phaseolus vulgaris
Phvul.004G063400 1.0kb upstream 1.0kb upstream 11888 true Chr04: 9062525-9074412 Phaseolus vulgaris
Phvul.004G063400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 9073413-9074412 Phaseolus vulgaris
Phvul.004G063400 1.0kb downstream 1.0kb downstream 11888 true Chr04: 9061525-9073412 Phaseolus vulgaris
Phvul.004G063400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 9061525-9062524 Phaseolus vulgaris
Phvul.004G063400 2.0kb upstream 2.0kb upstream 12888 true Chr04: 9062525-9075412 Phaseolus vulgaris
Phvul.004G063400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 9073413-9075412 Phaseolus vulgaris
Phvul.004G063400 2.0kb downstream 2.0kb downstream 12888 true Chr04: 9060525-9073412 Phaseolus vulgaris
Phvul.004G063400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 9060525-9062524 Phaseolus vulgaris
Phvul.004G063400 5.0kb upstream 5.0kb upstream 15888 true Chr04: 9062525-9078412 Phaseolus vulgaris
Phvul.004G063400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 9073413-9078412 Phaseolus vulgaris
Phvul.004G063400 5.0kb downstream 5.0kb downstream 15888 true Chr04: 9057525-9073412 Phaseolus vulgaris
Phvul.004G063400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 9057525-9062524 Phaseolus vulgaris
Phvul.004G063400 10.0kb upstream 10.0kb upstream 20888 true Chr04: 9062525-9083412 Phaseolus vulgaris
Phvul.004G063400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 9073413-9083412 Phaseolus vulgaris
Phvul.004G063400 10.0kb downstream 10.0kb downstream 20888 true Chr04: 9052525-9073412 Phaseolus vulgaris
Phvul.004G063400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 9052525-9062524 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312534 5265 Fabidae View MSA
124072248 5270 Rosid View MSA
123741125 5271 Pentapetalae View MSA
122796203 5272 Eudicot View MSA
122042445 5273 Angiosperm View MSA
121349857 5274 Embryophyte View MSA
123427562 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.662299 0.0 4.84572   Low
cufflinks 1.00714 0.0 7.06241    
cufflinks 2.50097 0.0 17.3196    
cufflinks 0.655478 0.0 3.77868   Low
cufflinks 2.10007 0.0 12.0749    
cufflinks 2.07371 0.0 12.9002    
cufflinks 2.66386 0.0 15.8217    
cufflinks 2.79238 0.0 18.9614    
cufflinks 1.68062 0.0 10.3849    
cufflinks 2.98308 0.0 17.6082   High
cufflinks 1.0124 0.0 8.52534    

0 Strain