Gene : Phvul.007G011000 P. vulgaris v2.1
Defline:  (1 of 6) K11294 - nucleolin (NCL, NSR1) Genomic Order:  107
Name:  ? Phvul.007G011000 Secondary Identifier:  ? PAC:37165719
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G011000 0.5kb upstream 0.5kb upstream 2685 true Chr07: 783229-785913 Phaseolus vulgaris
Phvul.007G011000 0.5kb upstream 0.5kb upstream 500 false Chr07: 783229-783728 Phaseolus vulgaris
Phvul.007G011000 0.5kb downstream 0.5kb downstream 2685 true Chr07: 783729-786413 Phaseolus vulgaris
Phvul.007G011000 0.5kb downstream 0.5kb downstream 500 false Chr07: 785914-786413 Phaseolus vulgaris
Phvul.007G011000 1.0kb upstream 1.0kb upstream 3185 true Chr07: 782729-785913 Phaseolus vulgaris
Phvul.007G011000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 782729-783728 Phaseolus vulgaris
Phvul.007G011000 1.0kb downstream 1.0kb downstream 3185 true Chr07: 783729-786913 Phaseolus vulgaris
Phvul.007G011000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 785914-786913 Phaseolus vulgaris
Phvul.007G011000 2.0kb upstream 2.0kb upstream 4185 true Chr07: 781729-785913 Phaseolus vulgaris
Phvul.007G011000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 781729-783728 Phaseolus vulgaris
Phvul.007G011000 2.0kb downstream 2.0kb downstream 4185 true Chr07: 783729-787913 Phaseolus vulgaris
Phvul.007G011000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 785914-787913 Phaseolus vulgaris
Phvul.007G011000 5.0kb upstream 5.0kb upstream 7185 true Chr07: 778729-785913 Phaseolus vulgaris
Phvul.007G011000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 778729-783728 Phaseolus vulgaris
Phvul.007G011000 5.0kb downstream 5.0kb downstream 7185 true Chr07: 783729-790913 Phaseolus vulgaris
Phvul.007G011000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 785914-790913 Phaseolus vulgaris
Phvul.007G011000 10.0kb upstream 10.0kb upstream 12185 true Chr07: 773729-785913 Phaseolus vulgaris
Phvul.007G011000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 773729-783728 Phaseolus vulgaris
Phvul.007G011000 10.0kb downstream 10.0kb downstream 12185 true Chr07: 783729-795913 Phaseolus vulgaris
Phvul.007G011000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 785914-795913 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311286 5265 Fabidae View MSA
124069375 5270 Rosid View MSA
123748314 5271 Pentapetalae View MSA
122791065 5272 Eudicot View MSA
122048889 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121348554 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.63731 0.0 13.3169    
cufflinks 8.20009 0.0 22.342   High
cufflinks 4.23195 0.0 12.2225    
cufflinks 3.18709 0.0 9.61706   Low
cufflinks 5.97948 0.0 16.8947    
cufflinks 3.56414 0.0 10.4944   Low
cufflinks 6.47624 0.0 17.93    
cufflinks 7.34727 0.0 20.0833    
cufflinks 6.49154 0.0 17.9758    
cufflinks 9.06585 0.0 24.5898   High
cufflinks 4.92979 0.0 14.1315    

0 Strain