Gene : Phvul.007G009600 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10644:SF1 - SPLICING FACTOR 3B SUBUNIT 3 Genomic Order:  93
Name:  ? Phvul.007G009600 Secondary Identifier:  ? PAC:37165978
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G009600 0.5kb upstream 0.5kb upstream 6167 true Chr07: 690051-696217 Phaseolus vulgaris
Phvul.007G009600 0.5kb upstream 0.5kb upstream 500 false Chr07: 695718-696217 Phaseolus vulgaris
Phvul.007G009600 0.5kb downstream 0.5kb downstream 6167 true Chr07: 689551-695717 Phaseolus vulgaris
Phvul.007G009600 0.5kb downstream 0.5kb downstream 500 false Chr07: 689551-690050 Phaseolus vulgaris
Phvul.007G009600 1.0kb upstream 1.0kb upstream 6667 true Chr07: 690051-696717 Phaseolus vulgaris
Phvul.007G009600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 695718-696717 Phaseolus vulgaris
Phvul.007G009600 1.0kb downstream 1.0kb downstream 6667 true Chr07: 689051-695717 Phaseolus vulgaris
Phvul.007G009600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 689051-690050 Phaseolus vulgaris
Phvul.007G009600 2.0kb upstream 2.0kb upstream 7667 true Chr07: 690051-697717 Phaseolus vulgaris
Phvul.007G009600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 695718-697717 Phaseolus vulgaris
Phvul.007G009600 2.0kb downstream 2.0kb downstream 7667 true Chr07: 688051-695717 Phaseolus vulgaris
Phvul.007G009600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 688051-690050 Phaseolus vulgaris
Phvul.007G009600 5.0kb upstream 5.0kb upstream 10667 true Chr07: 690051-700717 Phaseolus vulgaris
Phvul.007G009600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 695718-700717 Phaseolus vulgaris
Phvul.007G009600 5.0kb downstream 5.0kb downstream 10667 true Chr07: 685051-695717 Phaseolus vulgaris
Phvul.007G009600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 685051-690050 Phaseolus vulgaris
Phvul.007G009600 10.0kb upstream 10.0kb upstream 15667 true Chr07: 690051-705717 Phaseolus vulgaris
Phvul.007G009600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 695718-705717 Phaseolus vulgaris
Phvul.007G009600 10.0kb downstream 10.0kb downstream 15667 true Chr07: 680051-695717 Phaseolus vulgaris
Phvul.007G009600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 680051-690050 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305797 5265 Fabidae View MSA
124069298 5270 Rosid View MSA
123746995 5271 Pentapetalae View MSA
122794843 5272 Eudicot View MSA
122048690 5273 Angiosperm View MSA
121348178 5274 Embryophyte View MSA
123426142 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.62347 0.0 17.1879   Low
cufflinks 17.5126 0.0 46.1802    
cufflinks 13.2471 0.0 34.4828    
cufflinks 8.40786 0.0 21.7572   Low
cufflinks 15.7564 0.0 41.2296    
cufflinks 17.5027 0.0 46.1708    
cufflinks 15.9292 0.0 41.7963    
cufflinks 16.0125 0.0 42.0736    
cufflinks 17.4903 0.0 46.0481    
cufflinks 13.0185 0.0 33.8399    
cufflinks 15.8132 0.0 41.3921    

0 Strain