Gene : Phvul.007G010001 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31871:SF10 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K5K13 Genomic Order:  97
Name:  ? Phvul.007G010001 Secondary Identifier:  ? PAC:37165729
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G010001 0.5kb upstream 0.5kb upstream 2684 true Chr07: 713032-715715 Phaseolus vulgaris
Phvul.007G010001 0.5kb upstream 0.5kb upstream 500 false Chr07: 715216-715715 Phaseolus vulgaris
Phvul.007G010001 0.5kb downstream 0.5kb downstream 2684 true Chr07: 712532-715215 Phaseolus vulgaris
Phvul.007G010001 0.5kb downstream 0.5kb downstream 500 false Chr07: 712532-713031 Phaseolus vulgaris
Phvul.007G010001 1.0kb upstream 1.0kb upstream 3184 true Chr07: 713032-716215 Phaseolus vulgaris
Phvul.007G010001 1.0kb upstream 1.0kb upstream 1000 false Chr07: 715216-716215 Phaseolus vulgaris
Phvul.007G010001 1.0kb downstream 1.0kb downstream 3184 true Chr07: 712032-715215 Phaseolus vulgaris
Phvul.007G010001 1.0kb downstream 1.0kb downstream 1000 false Chr07: 712032-713031 Phaseolus vulgaris
Phvul.007G010001 2.0kb upstream 2.0kb upstream 4184 true Chr07: 713032-717215 Phaseolus vulgaris
Phvul.007G010001 2.0kb upstream 2.0kb upstream 2000 false Chr07: 715216-717215 Phaseolus vulgaris
Phvul.007G010001 2.0kb downstream 2.0kb downstream 4184 true Chr07: 711032-715215 Phaseolus vulgaris
Phvul.007G010001 2.0kb downstream 2.0kb downstream 2000 false Chr07: 711032-713031 Phaseolus vulgaris
Phvul.007G010001 5.0kb upstream 5.0kb upstream 7184 true Chr07: 713032-720215 Phaseolus vulgaris
Phvul.007G010001 5.0kb upstream 5.0kb upstream 5000 false Chr07: 715216-720215 Phaseolus vulgaris
Phvul.007G010001 5.0kb downstream 5.0kb downstream 7184 true Chr07: 708032-715215 Phaseolus vulgaris
Phvul.007G010001 5.0kb downstream 5.0kb downstream 5000 false Chr07: 708032-713031 Phaseolus vulgaris
Phvul.007G010001 10.0kb upstream 10.0kb upstream 12184 true Chr07: 713032-725215 Phaseolus vulgaris
Phvul.007G010001 10.0kb upstream 10.0kb upstream 10000 false Chr07: 715216-725215 Phaseolus vulgaris
Phvul.007G010001 10.0kb downstream 10.0kb downstream 12184 true Chr07: 703032-715215 Phaseolus vulgaris
Phvul.007G010001 10.0kb downstream 10.0kb downstream 10000 false Chr07: 703032-713031 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314737 5265 Fabidae View MSA
124070789 5270 Rosid View MSA
123747492 5271 Pentapetalae View MSA
122795039 5272 Eudicot View MSA
122043868 5273 Angiosperm View MSA
121310203 5274 Embryophyte View MSA
123347760 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.00386 0.0 10.6521   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.28575 0.0 1.25155 Low  
cufflinks 0.200258 0.0 0.898754 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.184972 0.0 0.833093 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.214499 0.0 0.961863 Low  
cufflinks 2.48263 0.0 9.04995   High

0 Strain