Gene : Phvul.004G065200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31722:SF10 - F1O19.11 PROTEIN Genomic Order:  686
Name:  ? Phvul.004G065200 Secondary Identifier:  ? PAC:37163423
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G065200 0.5kb upstream 0.5kb upstream 1939 true Chr04: 9579811-9581749 Phaseolus vulgaris
Phvul.004G065200 0.5kb upstream 0.5kb upstream 500 false Chr04: 9581250-9581749 Phaseolus vulgaris
Phvul.004G065200 0.5kb downstream 0.5kb downstream 1939 true Chr04: 9579311-9581249 Phaseolus vulgaris
Phvul.004G065200 0.5kb downstream 0.5kb downstream 500 false Chr04: 9579311-9579810 Phaseolus vulgaris
Phvul.004G065200 1.0kb upstream 1.0kb upstream 2439 true Chr04: 9579811-9582249 Phaseolus vulgaris
Phvul.004G065200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 9581250-9582249 Phaseolus vulgaris
Phvul.004G065200 1.0kb downstream 1.0kb downstream 2439 true Chr04: 9578811-9581249 Phaseolus vulgaris
Phvul.004G065200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 9578811-9579810 Phaseolus vulgaris
Phvul.004G065200 2.0kb upstream 2.0kb upstream 3439 true Chr04: 9579811-9583249 Phaseolus vulgaris
Phvul.004G065200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 9581250-9583249 Phaseolus vulgaris
Phvul.004G065200 2.0kb downstream 2.0kb downstream 3439 true Chr04: 9577811-9581249 Phaseolus vulgaris
Phvul.004G065200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 9577811-9579810 Phaseolus vulgaris
Phvul.004G065200 5.0kb upstream 5.0kb upstream 6439 true Chr04: 9579811-9586249 Phaseolus vulgaris
Phvul.004G065200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 9581250-9586249 Phaseolus vulgaris
Phvul.004G065200 5.0kb downstream 5.0kb downstream 6439 true Chr04: 9574811-9581249 Phaseolus vulgaris
Phvul.004G065200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 9574811-9579810 Phaseolus vulgaris
Phvul.004G065200 10.0kb upstream 10.0kb upstream 11439 true Chr04: 9579811-9591249 Phaseolus vulgaris
Phvul.004G065200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 9581250-9591249 Phaseolus vulgaris
Phvul.004G065200 10.0kb downstream 10.0kb downstream 11439 true Chr04: 9569811-9581249 Phaseolus vulgaris
Phvul.004G065200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 9569811-9579810 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311097 5265 Fabidae View MSA
124064398 5270 Rosid View MSA
123746732 5271 Pentapetalae View MSA
122786820 5272 Eudicot View MSA
122047207 5273 Angiosperm View MSA
121310707 5274 Embryophyte View MSA
123348126 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.41097 0.0 18.9208    
cufflinks 1.88823 0.0 6.43555   Low
cufflinks 30.4541 0.0 79.082   High
cufflinks 14.7387 0.0 40.3459    
cufflinks 10.7488 0.0 30.2805    
cufflinks 10.933 0.0 30.6423    
cufflinks 1.8269 0.0 6.23949   Low
cufflinks 2.3411 0.0 7.74311    
cufflinks 3.25696 0.0 10.4615    
cufflinks 1.40361 0.0 4.94567   Low
cufflinks 8.42018 0.0 24.3233    

0 Strain