Gene : Phvul.004G065100 P. vulgaris v2.1
Defline:  (1 of 2) K02920 - large subunit ribosomal protein L36e (RP-L36e, RPL36) Genomic Order:  685
Name:  ? Phvul.004G065100 Secondary Identifier:  ? PAC:37162858
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G065100 0.5kb upstream 0.5kb upstream 2077 true Chr04: 9547152-9549228 Phaseolus vulgaris
Phvul.004G065100 0.5kb upstream 0.5kb upstream 500 false Chr04: 9548729-9549228 Phaseolus vulgaris
Phvul.004G065100 0.5kb downstream 0.5kb downstream 2077 true Chr04: 9546652-9548728 Phaseolus vulgaris
Phvul.004G065100 0.5kb downstream 0.5kb downstream 500 false Chr04: 9546652-9547151 Phaseolus vulgaris
Phvul.004G065100 1.0kb upstream 1.0kb upstream 2577 true Chr04: 9547152-9549728 Phaseolus vulgaris
Phvul.004G065100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 9548729-9549728 Phaseolus vulgaris
Phvul.004G065100 1.0kb downstream 1.0kb downstream 2577 true Chr04: 9546152-9548728 Phaseolus vulgaris
Phvul.004G065100 1.0kb downstream 1.0kb downstream 1000 false Chr04: 9546152-9547151 Phaseolus vulgaris
Phvul.004G065100 2.0kb upstream 2.0kb upstream 3577 true Chr04: 9547152-9550728 Phaseolus vulgaris
Phvul.004G065100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 9548729-9550728 Phaseolus vulgaris
Phvul.004G065100 2.0kb downstream 2.0kb downstream 3577 true Chr04: 9545152-9548728 Phaseolus vulgaris
Phvul.004G065100 2.0kb downstream 2.0kb downstream 2000 false Chr04: 9545152-9547151 Phaseolus vulgaris
Phvul.004G065100 5.0kb upstream 5.0kb upstream 6577 true Chr04: 9547152-9553728 Phaseolus vulgaris
Phvul.004G065100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 9548729-9553728 Phaseolus vulgaris
Phvul.004G065100 5.0kb downstream 5.0kb downstream 6577 true Chr04: 9542152-9548728 Phaseolus vulgaris
Phvul.004G065100 5.0kb downstream 5.0kb downstream 5000 false Chr04: 9542152-9547151 Phaseolus vulgaris
Phvul.004G065100 10.0kb upstream 10.0kb upstream 11577 true Chr04: 9547152-9558728 Phaseolus vulgaris
Phvul.004G065100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 9548729-9558728 Phaseolus vulgaris
Phvul.004G065100 10.0kb downstream 10.0kb downstream 11577 true Chr04: 9537152-9548728 Phaseolus vulgaris
Phvul.004G065100 10.0kb downstream 10.0kb downstream 10000 false Chr04: 9537152-9547151 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314053 5265 Fabidae View MSA
124066905 5270 Rosid View MSA
123747585 5271 Pentapetalae View MSA
122796759 5272 Eudicot View MSA
122049276 5273 Angiosperm View MSA
121349373 5274 Embryophyte View MSA
123424507 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 135.909 0.0 359.077 High  
cufflinks 162.1 0.0 435.166 High High
cufflinks 79.6142 0.0 206.202 High  
cufflinks 173.475 0.0 465.783 High High
cufflinks 113.811 0.0 297.117 High  
cufflinks 59.4475 0.0 153.712 High Low
cufflinks 103.499 0.0 270.43 High  
cufflinks 133.415 0.0 353.828 High  
cufflinks 121.751 0.0 320.731 High  
cufflinks 54.4216 0.0 141.063 High Low
cufflinks 117.19 0.0 307.281 High  

0 Strain