Gene : Phvul.007G012200 P. vulgaris v2.1
Defline:  (1 of 11) PF01585 - G-patch domain (G-patch) Genomic Order:  119
Name:  ? Phvul.007G012200 Secondary Identifier:  ? PAC:37166534
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G012200 0.5kb upstream 0.5kb upstream 2518 true Chr07: 862770-865287 Phaseolus vulgaris
Phvul.007G012200 0.5kb upstream 0.5kb upstream 500 false Chr07: 864788-865287 Phaseolus vulgaris
Phvul.007G012200 0.5kb downstream 0.5kb downstream 2518 true Chr07: 862270-864787 Phaseolus vulgaris
Phvul.007G012200 0.5kb downstream 0.5kb downstream 500 false Chr07: 862270-862769 Phaseolus vulgaris
Phvul.007G012200 1.0kb upstream 1.0kb upstream 3018 true Chr07: 862770-865787 Phaseolus vulgaris
Phvul.007G012200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 864788-865787 Phaseolus vulgaris
Phvul.007G012200 1.0kb downstream 1.0kb downstream 3018 true Chr07: 861770-864787 Phaseolus vulgaris
Phvul.007G012200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 861770-862769 Phaseolus vulgaris
Phvul.007G012200 2.0kb upstream 2.0kb upstream 4018 true Chr07: 862770-866787 Phaseolus vulgaris
Phvul.007G012200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 864788-866787 Phaseolus vulgaris
Phvul.007G012200 2.0kb downstream 2.0kb downstream 4018 true Chr07: 860770-864787 Phaseolus vulgaris
Phvul.007G012200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 860770-862769 Phaseolus vulgaris
Phvul.007G012200 5.0kb upstream 5.0kb upstream 7018 true Chr07: 862770-869787 Phaseolus vulgaris
Phvul.007G012200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 864788-869787 Phaseolus vulgaris
Phvul.007G012200 5.0kb downstream 5.0kb downstream 7018 true Chr07: 857770-864787 Phaseolus vulgaris
Phvul.007G012200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 857770-862769 Phaseolus vulgaris
Phvul.007G012200 10.0kb upstream 10.0kb upstream 12018 true Chr07: 862770-874787 Phaseolus vulgaris
Phvul.007G012200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 864788-874787 Phaseolus vulgaris
Phvul.007G012200 10.0kb downstream 10.0kb downstream 12018 true Chr07: 852770-864787 Phaseolus vulgaris
Phvul.007G012200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 852770-862769 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296239 5265 Fabidae View MSA
124065567 5270 Rosid View MSA
123743393 5271 Pentapetalae View MSA
122790143 5272 Eudicot View MSA
122044236 5273 Angiosperm View MSA
121347132 5274 Embryophyte View MSA
123425168 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.8121 0.0 44.6409   High
cufflinks 6.95134 0.0 21.4326    
cufflinks 5.46413 0.0 17.2358    
cufflinks 6.04278 0.0 19.1857    
cufflinks 4.12673 0.0 13.7061   Low
cufflinks 4.68051 0.0 15.0491    
cufflinks 7.42247 0.0 22.6376    
cufflinks 8.65607 0.0 25.6762    
cufflinks 4.35488 0.0 14.1319   Low
cufflinks 7.11414 0.0 21.9429    
cufflinks 5.5441 0.0 17.6558    

0 Strain