Gene : Phvul.004G063500 P. vulgaris v2.1
Defline:  (1 of 4) PTHR31169:SF1 - ZINC-FINGER DOMAIN OF MONOAMINE-OXIDASE A REPRESSOR R1 PROTEIN Genomic Order:  667
Name:  ? Phvul.004G063500 Secondary Identifier:  ? PAC:37161592
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G063500 0.5kb upstream 0.5kb upstream 5885 true Chr04: 9083578-9089462 Phaseolus vulgaris
Phvul.004G063500 0.5kb upstream 0.5kb upstream 500 false Chr04: 9088963-9089462 Phaseolus vulgaris
Phvul.004G063500 0.5kb downstream 0.5kb downstream 5885 true Chr04: 9083078-9088962 Phaseolus vulgaris
Phvul.004G063500 0.5kb downstream 0.5kb downstream 500 false Chr04: 9083078-9083577 Phaseolus vulgaris
Phvul.004G063500 1.0kb upstream 1.0kb upstream 6385 true Chr04: 9083578-9089962 Phaseolus vulgaris
Phvul.004G063500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 9088963-9089962 Phaseolus vulgaris
Phvul.004G063500 1.0kb downstream 1.0kb downstream 6385 true Chr04: 9082578-9088962 Phaseolus vulgaris
Phvul.004G063500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 9082578-9083577 Phaseolus vulgaris
Phvul.004G063500 2.0kb upstream 2.0kb upstream 7385 true Chr04: 9083578-9090962 Phaseolus vulgaris
Phvul.004G063500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 9088963-9090962 Phaseolus vulgaris
Phvul.004G063500 2.0kb downstream 2.0kb downstream 7385 true Chr04: 9081578-9088962 Phaseolus vulgaris
Phvul.004G063500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 9081578-9083577 Phaseolus vulgaris
Phvul.004G063500 5.0kb upstream 5.0kb upstream 10385 true Chr04: 9083578-9093962 Phaseolus vulgaris
Phvul.004G063500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 9088963-9093962 Phaseolus vulgaris
Phvul.004G063500 5.0kb downstream 5.0kb downstream 10385 true Chr04: 9078578-9088962 Phaseolus vulgaris
Phvul.004G063500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 9078578-9083577 Phaseolus vulgaris
Phvul.004G063500 10.0kb upstream 10.0kb upstream 15385 true Chr04: 9083578-9098962 Phaseolus vulgaris
Phvul.004G063500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 9088963-9098962 Phaseolus vulgaris
Phvul.004G063500 10.0kb downstream 10.0kb downstream 15385 true Chr04: 9073578-9088962 Phaseolus vulgaris
Phvul.004G063500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 9073578-9083577 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312534 5265 Fabidae View MSA
124072248 5270 Rosid View MSA
123741125 5271 Pentapetalae View MSA
122796203 5272 Eudicot View MSA
122042445 5273 Angiosperm View MSA
121349857 5274 Embryophyte View MSA
123427562 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.885548 0.0 2.99459    
cufflinks 3.49689 0.0 10.1455    
cufflinks 1.5429 0.0 4.90047    
cufflinks 0.718974 0.0 2.52488    
cufflinks 1.48551 0.0 4.80935    
cufflinks 2.52614 0.0 7.59571    
cufflinks 3.1345 0.0 9.19152    
cufflinks 2.73564 0.0 8.08005    
cufflinks 2.78848 0.0 8.3104    
cufflinks 0.16976 0.0 0.669007 Low Low
cufflinks 1.66385 0.0 5.2932    

0 Strain