Gene : Phvul.004G065700 P. vulgaris v2.1
Defline:  (1 of 3) K02993 - small subunit ribosomal protein S7e (RP-S7e, RPS7) Genomic Order:  691
Name:  ? Phvul.004G065700 Secondary Identifier:  ? PAC:37162675
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G065700 0.5kb upstream 0.5kb upstream 2727 true Chr04: 9675660-9678386 Phaseolus vulgaris
Phvul.004G065700 0.5kb upstream 0.5kb upstream 500 false Chr04: 9677887-9678386 Phaseolus vulgaris
Phvul.004G065700 0.5kb downstream 0.5kb downstream 2727 true Chr04: 9675160-9677886 Phaseolus vulgaris
Phvul.004G065700 0.5kb downstream 0.5kb downstream 500 false Chr04: 9675160-9675659 Phaseolus vulgaris
Phvul.004G065700 1.0kb upstream 1.0kb upstream 3227 true Chr04: 9675660-9678886 Phaseolus vulgaris
Phvul.004G065700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 9677887-9678886 Phaseolus vulgaris
Phvul.004G065700 1.0kb downstream 1.0kb downstream 3227 true Chr04: 9674660-9677886 Phaseolus vulgaris
Phvul.004G065700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 9674660-9675659 Phaseolus vulgaris
Phvul.004G065700 2.0kb upstream 2.0kb upstream 4227 true Chr04: 9675660-9679886 Phaseolus vulgaris
Phvul.004G065700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 9677887-9679886 Phaseolus vulgaris
Phvul.004G065700 2.0kb downstream 2.0kb downstream 4227 true Chr04: 9673660-9677886 Phaseolus vulgaris
Phvul.004G065700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 9673660-9675659 Phaseolus vulgaris
Phvul.004G065700 5.0kb upstream 5.0kb upstream 7227 true Chr04: 9675660-9682886 Phaseolus vulgaris
Phvul.004G065700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 9677887-9682886 Phaseolus vulgaris
Phvul.004G065700 5.0kb downstream 5.0kb downstream 7227 true Chr04: 9670660-9677886 Phaseolus vulgaris
Phvul.004G065700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 9670660-9675659 Phaseolus vulgaris
Phvul.004G065700 10.0kb upstream 10.0kb upstream 12227 true Chr04: 9675660-9687886 Phaseolus vulgaris
Phvul.004G065700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 9677887-9687886 Phaseolus vulgaris
Phvul.004G065700 10.0kb downstream 10.0kb downstream 12227 true Chr04: 9665660-9677886 Phaseolus vulgaris
Phvul.004G065700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 9665660-9675659 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254659 5265 Fabidae View MSA
124072179 5270 Rosid View MSA
123738806 5271 Pentapetalae View MSA
122790365 5272 Eudicot View MSA
122049624 5273 Angiosperm View MSA
121350369 5274 Embryophyte View MSA
123424764 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.2889 0.0 78.7129    
cufflinks 31.6042 0.0 82.0994    
cufflinks 16.4103 0.0 44.1865   Low
cufflinks 39.7693 0.0 102.928 High High
cufflinks 28.1032 0.0 73.5247    
cufflinks 14.3578 0.0 39.1825   Low
cufflinks 25.6114 0.0 67.1705    
cufflinks 30.1171 0.0 78.2869 High  
cufflinks 36.0164 0.0 93.3234 High High
cufflinks 17.526 0.0 47.1036   Low
cufflinks 23.6255 0.0 62.3806    

0 Strain