Gene : Phvul.004G050800 P. vulgaris v2.1

Defline:  (1 of 123) PTHR24078 - DNAJ HOMOLOG SUBFAMILY C MEMBER Genomic Order:  543
Name:  ? Phvul.004G050800 Secondary Identifier:  ? PAC:37163335

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G050800 0.5kb upstream 0.5kb upstream 4883 true Chr04: 6516333-6521215 Phaseolus vulgaris
Phvul.004G050800 0.5kb upstream 0.5kb upstream 500 false Chr04: 6520716-6521215 Phaseolus vulgaris
Phvul.004G050800 0.5kb downstream 0.5kb downstream 4883 true Chr04: 6515833-6520715 Phaseolus vulgaris
Phvul.004G050800 0.5kb downstream 0.5kb downstream 500 false Chr04: 6515833-6516332 Phaseolus vulgaris
Phvul.004G050800 1.0kb upstream 1.0kb upstream 5383 true Chr04: 6516333-6521715 Phaseolus vulgaris
Phvul.004G050800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 6520716-6521715 Phaseolus vulgaris
Phvul.004G050800 1.0kb downstream 1.0kb downstream 5383 true Chr04: 6515333-6520715 Phaseolus vulgaris
Phvul.004G050800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 6515333-6516332 Phaseolus vulgaris
Phvul.004G050800 2.0kb upstream 2.0kb upstream 6383 true Chr04: 6516333-6522715 Phaseolus vulgaris
Phvul.004G050800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 6520716-6522715 Phaseolus vulgaris
Phvul.004G050800 2.0kb downstream 2.0kb downstream 6383 true Chr04: 6514333-6520715 Phaseolus vulgaris
Phvul.004G050800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 6514333-6516332 Phaseolus vulgaris
Phvul.004G050800 5.0kb upstream 5.0kb upstream 9383 true Chr04: 6516333-6525715 Phaseolus vulgaris
Phvul.004G050800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 6520716-6525715 Phaseolus vulgaris
Phvul.004G050800 5.0kb downstream 5.0kb downstream 9383 true Chr04: 6511333-6520715 Phaseolus vulgaris
Phvul.004G050800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 6511333-6516332 Phaseolus vulgaris
Phvul.004G050800 10.0kb upstream 10.0kb upstream 14383 true Chr04: 6516333-6530715 Phaseolus vulgaris
Phvul.004G050800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 6520716-6530715 Phaseolus vulgaris
Phvul.004G050800 10.0kb downstream 10.0kb downstream 14383 true Chr04: 6506333-6520715 Phaseolus vulgaris
Phvul.004G050800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 6506333-6516332 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307995 5265 Fabidae View MSA
124063698 5270 Rosid View MSA
123739082 5271 Pentapetalae View MSA
122785668 5272 Eudicot View MSA
122047261 5273 Angiosperm View MSA
123429067 5275 Viridiplantae View MSA
121351379 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.04851 0.0 34.6756   High
cufflinks 5.00305 0.0 23.0797    
cufflinks 9.46034 0.0 40.1396   High
cufflinks 7.45565 0.0 28.2721   High
cufflinks 4.89299 0.0 16.2046    
cufflinks 6.31542 0.0 26.4599    
cufflinks 5.11011 0.0 22.31    
cufflinks 4.26719 0.0 19.2284   Low
cufflinks 4.33097 0.0 18.7677    
cufflinks 4.70162 0.0 20.1963    
cufflinks 4.72896 0.0 20.8556    

0 Strain