Gene : Phvul.007G001600 P. vulgaris v2.1
Defline:  (1 of 1) K10884 - ATP-dependent DNA helicase 2 subunit 1 (XRCC6, KU70, G22P1) Genomic Order:  15
Name:  ? Phvul.007G001600 Secondary Identifier:  ? PAC:37166783
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G001600 0.5kb upstream 0.5kb upstream 12177 true Chr07: 84706-96882 Phaseolus vulgaris
Phvul.007G001600 0.5kb upstream 0.5kb upstream 500 false Chr07: 96383-96882 Phaseolus vulgaris
Phvul.007G001600 0.5kb downstream 0.5kb downstream 12177 true Chr07: 84206-96382 Phaseolus vulgaris
Phvul.007G001600 0.5kb downstream 0.5kb downstream 500 false Chr07: 84206-84705 Phaseolus vulgaris
Phvul.007G001600 1.0kb upstream 1.0kb upstream 12677 true Chr07: 84706-97382 Phaseolus vulgaris
Phvul.007G001600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 96383-97382 Phaseolus vulgaris
Phvul.007G001600 1.0kb downstream 1.0kb downstream 12677 true Chr07: 83706-96382 Phaseolus vulgaris
Phvul.007G001600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 83706-84705 Phaseolus vulgaris
Phvul.007G001600 2.0kb upstream 2.0kb upstream 13677 true Chr07: 84706-98382 Phaseolus vulgaris
Phvul.007G001600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 96383-98382 Phaseolus vulgaris
Phvul.007G001600 2.0kb downstream 2.0kb downstream 13677 true Chr07: 82706-96382 Phaseolus vulgaris
Phvul.007G001600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 82706-84705 Phaseolus vulgaris
Phvul.007G001600 5.0kb upstream 5.0kb upstream 16677 true Chr07: 84706-101382 Phaseolus vulgaris
Phvul.007G001600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 96383-101382 Phaseolus vulgaris
Phvul.007G001600 5.0kb downstream 5.0kb downstream 16677 true Chr07: 79706-96382 Phaseolus vulgaris
Phvul.007G001600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 79706-84705 Phaseolus vulgaris
Phvul.007G001600 10.0kb upstream 10.0kb upstream 21677 true Chr07: 84706-106382 Phaseolus vulgaris
Phvul.007G001600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 96383-106382 Phaseolus vulgaris
Phvul.007G001600 10.0kb downstream 10.0kb downstream 21677 true Chr07: 74706-96382 Phaseolus vulgaris
Phvul.007G001600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 74706-84705 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304985 5265 Fabidae View MSA
124069563 5270 Rosid View MSA
123741981 5271 Pentapetalae View MSA
122794282 5272 Eudicot View MSA
122048334 5273 Angiosperm View MSA
121348405 5274 Embryophyte View MSA
123427822 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.08872 0.0 16.7077    
cufflinks 4.87255 0.0 19.4985    
cufflinks 4.33429 0.0 14.9311    
cufflinks 3.4445 0.0 12.6335   Low
cufflinks 3.74985 0.0 13.5068    
cufflinks 4.84027 0.0 18.9404    
cufflinks 7.31966 0.0 26.8814   High
cufflinks 9.70329 0.0 32.8993   High
cufflinks 7.67779 0.0 27.5524   High
cufflinks 5.73893 0.0 22.117    
cufflinks 4.23383 0.0 17.4495    

0 Strain