Gene : Phvul.004G054200 P. vulgaris v2.1
Defline:  (1 of 1) K00387 - sulfite oxidase (SUOX) Genomic Order:  574
Name:  ? Phvul.004G054200 Secondary Identifier:  ? PAC:37163314
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5326 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G054200 0.5kb upstream 0.5kb upstream 7575 true Chr04: 7248862-7256436 Phaseolus vulgaris
Phvul.004G054200 0.5kb upstream 0.5kb upstream 500 false Chr04: 7248862-7249361 Phaseolus vulgaris
Phvul.004G054200 0.5kb downstream 0.5kb downstream 7575 true Chr04: 7249362-7256936 Phaseolus vulgaris
Phvul.004G054200 0.5kb downstream 0.5kb downstream 500 false Chr04: 7256437-7256936 Phaseolus vulgaris
Phvul.004G054200 1.0kb upstream 1.0kb upstream 8075 true Chr04: 7248362-7256436 Phaseolus vulgaris
Phvul.004G054200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 7248362-7249361 Phaseolus vulgaris
Phvul.004G054200 1.0kb downstream 1.0kb downstream 8075 true Chr04: 7249362-7257436 Phaseolus vulgaris
Phvul.004G054200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 7256437-7257436 Phaseolus vulgaris
Phvul.004G054200 2.0kb upstream 2.0kb upstream 9075 true Chr04: 7247362-7256436 Phaseolus vulgaris
Phvul.004G054200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 7247362-7249361 Phaseolus vulgaris
Phvul.004G054200 2.0kb downstream 2.0kb downstream 9075 true Chr04: 7249362-7258436 Phaseolus vulgaris
Phvul.004G054200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 7256437-7258436 Phaseolus vulgaris
Phvul.004G054200 5.0kb upstream 5.0kb upstream 12075 true Chr04: 7244362-7256436 Phaseolus vulgaris
Phvul.004G054200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 7244362-7249361 Phaseolus vulgaris
Phvul.004G054200 5.0kb downstream 5.0kb downstream 12075 true Chr04: 7249362-7261436 Phaseolus vulgaris
Phvul.004G054200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 7256437-7261436 Phaseolus vulgaris
Phvul.004G054200 10.0kb upstream 10.0kb upstream 17075 true Chr04: 7239362-7256436 Phaseolus vulgaris
Phvul.004G054200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 7239362-7249361 Phaseolus vulgaris
Phvul.004G054200 10.0kb downstream 10.0kb downstream 17075 true Chr04: 7249362-7266436 Phaseolus vulgaris
Phvul.004G054200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 7256437-7266436 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302420 5265 Fabidae View MSA
124063548 5270 Rosid View MSA
123749301 5271 Pentapetalae View MSA
122793772 5272 Eudicot View MSA
122044053 5273 Angiosperm View MSA
121351692 5274 Embryophyte View MSA
123426771 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.9558 0.0 34.4493   Low
cufflinks 20.5687 0.0 53.4001    
cufflinks 34.0707 0.0 88.2317   High
cufflinks 27.4348 0.0 70.9484   High
cufflinks 14.8317 0.0 39.22    
cufflinks 19.1614 0.0 49.8465    
cufflinks 12.0615 0.0 32.1491   Low
cufflinks 16.7154 0.0 43.6339    
cufflinks 15.7695 0.0 41.3807    
cufflinks 20.8369 0.0 54.0945    
cufflinks 15.1637 0.0 39.9621    

0 Strain