Gene : Phvul.004G055100 P. vulgaris v2.1
Genomic Order:  584 Name:  ? Phvul.004G055100
Secondary Identifier:  ? PAC:37163355
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G055100 0.5kb upstream 0.5kb upstream 3808 true Chr04: 7431683-7435490 Phaseolus vulgaris
Phvul.004G055100 0.5kb upstream 0.5kb upstream 500 false Chr04: 7431683-7432182 Phaseolus vulgaris
Phvul.004G055100 0.5kb downstream 0.5kb downstream 3808 true Chr04: 7432183-7435990 Phaseolus vulgaris
Phvul.004G055100 0.5kb downstream 0.5kb downstream 500 false Chr04: 7435491-7435990 Phaseolus vulgaris
Phvul.004G055100 1.0kb upstream 1.0kb upstream 4308 true Chr04: 7431183-7435490 Phaseolus vulgaris
Phvul.004G055100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 7431183-7432182 Phaseolus vulgaris
Phvul.004G055100 1.0kb downstream 1.0kb downstream 4308 true Chr04: 7432183-7436490 Phaseolus vulgaris
Phvul.004G055100 1.0kb downstream 1.0kb downstream 1000 false Chr04: 7435491-7436490 Phaseolus vulgaris
Phvul.004G055100 2.0kb upstream 2.0kb upstream 5308 true Chr04: 7430183-7435490 Phaseolus vulgaris
Phvul.004G055100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 7430183-7432182 Phaseolus vulgaris
Phvul.004G055100 2.0kb downstream 2.0kb downstream 5308 true Chr04: 7432183-7437490 Phaseolus vulgaris
Phvul.004G055100 2.0kb downstream 2.0kb downstream 2000 false Chr04: 7435491-7437490 Phaseolus vulgaris
Phvul.004G055100 5.0kb upstream 5.0kb upstream 8308 true Chr04: 7427183-7435490 Phaseolus vulgaris
Phvul.004G055100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 7427183-7432182 Phaseolus vulgaris
Phvul.004G055100 5.0kb downstream 5.0kb downstream 8308 true Chr04: 7432183-7440490 Phaseolus vulgaris
Phvul.004G055100 5.0kb downstream 5.0kb downstream 5000 false Chr04: 7435491-7440490 Phaseolus vulgaris
Phvul.004G055100 10.0kb upstream 10.0kb upstream 13308 true Chr04: 7422183-7435490 Phaseolus vulgaris
Phvul.004G055100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 7422183-7432182 Phaseolus vulgaris
Phvul.004G055100 10.0kb downstream 10.0kb downstream 13308 true Chr04: 7432183-7445490 Phaseolus vulgaris
Phvul.004G055100 10.0kb downstream 10.0kb downstream 10000 false Chr04: 7435491-7445490 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310430 5265 Fabidae View MSA
124073179 5270 Rosid View MSA
123752262 5271 Pentapetalae View MSA
122794539 5272 Eudicot View MSA
122050080 5273 Angiosperm View MSA
121311726 5274 Embryophyte View MSA
123348985 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.8135 0.0 66.0086    
cufflinks 6.35727 0.0 19.4262   Low
cufflinks 41.6239 0.0 107.961 High High
cufflinks 14.8175 0.0 41.3158    
cufflinks 28.3582 0.0 75.0003    
cufflinks 10.4897 0.0 30.2146    
cufflinks 18.3286 0.0 50.1013    
cufflinks 12.6536 0.0 35.6892    
cufflinks 30.9913 0.0 81.5194 High High
cufflinks 14.1961 0.0 39.8237    
cufflinks 16.856 0.0 46.6339    

0 Strain