Gene : Phvul.004G056300 P. vulgaris v2.1
Defline:  (1 of 2) K00413 - ubiquinol-cytochrome c reductase cytochrome c1 subunit (CYC1, CYT1, petC) Genomic Order:  596
Name:  ? Phvul.004G056300 Secondary Identifier:  ? PAC:37162652
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G056300 0.5kb upstream 0.5kb upstream 7609 true Chr04: 7632418-7640026 Phaseolus vulgaris
Phvul.004G056300 0.5kb upstream 0.5kb upstream 500 false Chr04: 7632418-7632917 Phaseolus vulgaris
Phvul.004G056300 0.5kb downstream 0.5kb downstream 7609 true Chr04: 7632918-7640526 Phaseolus vulgaris
Phvul.004G056300 0.5kb downstream 0.5kb downstream 500 false Chr04: 7640027-7640526 Phaseolus vulgaris
Phvul.004G056300 1.0kb upstream 1.0kb upstream 8109 true Chr04: 7631918-7640026 Phaseolus vulgaris
Phvul.004G056300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 7631918-7632917 Phaseolus vulgaris
Phvul.004G056300 1.0kb downstream 1.0kb downstream 8109 true Chr04: 7632918-7641026 Phaseolus vulgaris
Phvul.004G056300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 7640027-7641026 Phaseolus vulgaris
Phvul.004G056300 2.0kb upstream 2.0kb upstream 9109 true Chr04: 7630918-7640026 Phaseolus vulgaris
Phvul.004G056300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 7630918-7632917 Phaseolus vulgaris
Phvul.004G056300 2.0kb downstream 2.0kb downstream 9109 true Chr04: 7632918-7642026 Phaseolus vulgaris
Phvul.004G056300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 7640027-7642026 Phaseolus vulgaris
Phvul.004G056300 5.0kb upstream 5.0kb upstream 12109 true Chr04: 7627918-7640026 Phaseolus vulgaris
Phvul.004G056300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 7627918-7632917 Phaseolus vulgaris
Phvul.004G056300 5.0kb downstream 5.0kb downstream 12109 true Chr04: 7632918-7645026 Phaseolus vulgaris
Phvul.004G056300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 7640027-7645026 Phaseolus vulgaris
Phvul.004G056300 10.0kb upstream 10.0kb upstream 17109 true Chr04: 7622918-7640026 Phaseolus vulgaris
Phvul.004G056300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 7622918-7632917 Phaseolus vulgaris
Phvul.004G056300 10.0kb downstream 10.0kb downstream 17109 true Chr04: 7632918-7650026 Phaseolus vulgaris
Phvul.004G056300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 7640027-7650026 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305869 5265 Fabidae View MSA
124073211 5270 Rosid View MSA
123745446 5271 Pentapetalae View MSA
122788425 5272 Eudicot View MSA
122048813 5273 Angiosperm View MSA
121344559 5274 Embryophyte View MSA
123427665 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 47.5465 0.0 123.472 High  
cufflinks 29.3176 0.0 75.9122    
cufflinks 26.1858 0.0 67.9272    
cufflinks 78.65 0.0 209.025 High High
cufflinks 29.4009 0.0 76.1361    
cufflinks 30.0134 0.0 77.6741    
cufflinks 29.6427 0.0 76.7404 High  
cufflinks 36.3885 0.0 94.0631 High  
cufflinks 39.7224 0.0 102.699 High  
cufflinks 21.2566 0.0 55.5875   Low
cufflinks 35.125 0.0 90.7978 High  

0 Strain