Gene : Phvul.007G005100 P. vulgaris v2.1
Defline:  (1 of 12) K11000 - callose synthase [EC:2.4.1.-] Glc b1-3 Glc (CALS) Genomic Order:  48
Name:  ? Phvul.007G005100 Secondary Identifier:  ? PAC:37167474
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-6773 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G005100 0.5kb upstream 0.5kb upstream 17149 true Chr07: 387730-404878 Phaseolus vulgaris
Phvul.007G005100 0.5kb upstream 0.5kb upstream 500 false Chr07: 404379-404878 Phaseolus vulgaris
Phvul.007G005100 0.5kb downstream 0.5kb downstream 17149 true Chr07: 387230-404378 Phaseolus vulgaris
Phvul.007G005100 0.5kb downstream 0.5kb downstream 500 false Chr07: 387230-387729 Phaseolus vulgaris
Phvul.007G005100 1.0kb upstream 1.0kb upstream 17649 true Chr07: 387730-405378 Phaseolus vulgaris
Phvul.007G005100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 404379-405378 Phaseolus vulgaris
Phvul.007G005100 1.0kb downstream 1.0kb downstream 17649 true Chr07: 386730-404378 Phaseolus vulgaris
Phvul.007G005100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 386730-387729 Phaseolus vulgaris
Phvul.007G005100 2.0kb upstream 2.0kb upstream 18649 true Chr07: 387730-406378 Phaseolus vulgaris
Phvul.007G005100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 404379-406378 Phaseolus vulgaris
Phvul.007G005100 2.0kb downstream 2.0kb downstream 18649 true Chr07: 385730-404378 Phaseolus vulgaris
Phvul.007G005100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 385730-387729 Phaseolus vulgaris
Phvul.007G005100 5.0kb upstream 5.0kb upstream 21649 true Chr07: 387730-409378 Phaseolus vulgaris
Phvul.007G005100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 404379-409378 Phaseolus vulgaris
Phvul.007G005100 5.0kb downstream 5.0kb downstream 21649 true Chr07: 382730-404378 Phaseolus vulgaris
Phvul.007G005100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 382730-387729 Phaseolus vulgaris
Phvul.007G005100 10.0kb upstream 10.0kb upstream 26649 true Chr07: 387730-414378 Phaseolus vulgaris
Phvul.007G005100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 404379-414378 Phaseolus vulgaris
Phvul.007G005100 10.0kb downstream 10.0kb downstream 26649 true Chr07: 377730-404378 Phaseolus vulgaris
Phvul.007G005100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 377730-387729 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301991 5265 Fabidae View MSA
124072639 5270 Rosid View MSA
123745171 5271 Pentapetalae View MSA
122788947 5272 Eudicot View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.492536 0.0 1.58439   Low
cufflinks 6.51476 0.0 16.8454    
cufflinks 1.27547 0.0 3.6783    
cufflinks 0.52259 0.0 1.68646 Low Low
cufflinks 4.63291 0.0 12.1104    
cufflinks 8.19276 0.0 21.1946    
cufflinks 5.72669 0.0 14.8375    
cufflinks 11.9446 0.0 31.3098   High
cufflinks 4.20389 0.0 11.0277    
cufflinks 1.35175 0.0 3.88042    
cufflinks 3.37395 0.0 8.97913    

0 Strain