Gene : Phvul.004G060100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR24073:SF597 - RAS-RELATED PROTEIN RABB1B Genomic Order:  633
Name:  ? Phvul.004G060100 Secondary Identifier:  ? PAC:37161559
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G060100 0.5kb upstream 0.5kb upstream 4306 true Chr04: 8429754-8434059 Phaseolus vulgaris
Phvul.004G060100 0.5kb upstream 0.5kb upstream 500 false Chr04: 8429754-8430253 Phaseolus vulgaris
Phvul.004G060100 0.5kb downstream 0.5kb downstream 4306 true Chr04: 8430254-8434559 Phaseolus vulgaris
Phvul.004G060100 0.5kb downstream 0.5kb downstream 500 false Chr04: 8434060-8434559 Phaseolus vulgaris
Phvul.004G060100 1.0kb upstream 1.0kb upstream 4806 true Chr04: 8429254-8434059 Phaseolus vulgaris
Phvul.004G060100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 8429254-8430253 Phaseolus vulgaris
Phvul.004G060100 1.0kb downstream 1.0kb downstream 4806 true Chr04: 8430254-8435059 Phaseolus vulgaris
Phvul.004G060100 1.0kb downstream 1.0kb downstream 1000 false Chr04: 8434060-8435059 Phaseolus vulgaris
Phvul.004G060100 2.0kb upstream 2.0kb upstream 5806 true Chr04: 8428254-8434059 Phaseolus vulgaris
Phvul.004G060100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 8428254-8430253 Phaseolus vulgaris
Phvul.004G060100 2.0kb downstream 2.0kb downstream 5806 true Chr04: 8430254-8436059 Phaseolus vulgaris
Phvul.004G060100 2.0kb downstream 2.0kb downstream 2000 false Chr04: 8434060-8436059 Phaseolus vulgaris
Phvul.004G060100 5.0kb upstream 5.0kb upstream 8806 true Chr04: 8425254-8434059 Phaseolus vulgaris
Phvul.004G060100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 8425254-8430253 Phaseolus vulgaris
Phvul.004G060100 5.0kb downstream 5.0kb downstream 8806 true Chr04: 8430254-8439059 Phaseolus vulgaris
Phvul.004G060100 5.0kb downstream 5.0kb downstream 5000 false Chr04: 8434060-8439059 Phaseolus vulgaris
Phvul.004G060100 10.0kb upstream 10.0kb upstream 13806 true Chr04: 8420254-8434059 Phaseolus vulgaris
Phvul.004G060100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 8420254-8430253 Phaseolus vulgaris
Phvul.004G060100 10.0kb downstream 10.0kb downstream 13806 true Chr04: 8430254-8444059 Phaseolus vulgaris
Phvul.004G060100 10.0kb downstream 10.0kb downstream 10000 false Chr04: 8434060-8444059 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303883 5265 Fabidae View MSA
124067006 5270 Rosid View MSA
123745328 5271 Pentapetalae View MSA
122797849 5272 Eudicot View MSA
122043695 5273 Angiosperm View MSA
121349962 5274 Embryophyte View MSA
123426577 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 38.0971 0.0 98.4743 High High
cufflinks 25.1368 0.0 65.5289    
cufflinks 17.434 0.0 46.3989    
cufflinks 20.67 0.0 54.5667    
cufflinks 20.7202 0.0 54.6914    
cufflinks 10.6658 0.0 29.5692   Low
cufflinks 19.1397 0.0 50.5634    
cufflinks 18.2807 0.0 48.433    
cufflinks 13.7586 0.0 37.2965   Low
cufflinks 30.2146 0.0 78.3513   High
cufflinks 24.8612 0.0 64.938    

0 Strain