Gene : Phvul.007G005500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR22957:SF269 - RABGAP/TBC DOMAIN-CONTAINING PROTEIN Genomic Order:  52
Name:  ? Phvul.007G005500 Secondary Identifier:  ? PAC:37167161
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G005500 0.5kb upstream 0.5kb upstream 9382 true Chr07: 418304-427685 Phaseolus vulgaris
Phvul.007G005500 0.5kb upstream 0.5kb upstream 500 false Chr07: 427186-427685 Phaseolus vulgaris
Phvul.007G005500 0.5kb downstream 0.5kb downstream 9382 true Chr07: 417804-427185 Phaseolus vulgaris
Phvul.007G005500 0.5kb downstream 0.5kb downstream 500 false Chr07: 417804-418303 Phaseolus vulgaris
Phvul.007G005500 1.0kb upstream 1.0kb upstream 9882 true Chr07: 418304-428185 Phaseolus vulgaris
Phvul.007G005500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 427186-428185 Phaseolus vulgaris
Phvul.007G005500 1.0kb downstream 1.0kb downstream 9882 true Chr07: 417304-427185 Phaseolus vulgaris
Phvul.007G005500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 417304-418303 Phaseolus vulgaris
Phvul.007G005500 2.0kb upstream 2.0kb upstream 10882 true Chr07: 418304-429185 Phaseolus vulgaris
Phvul.007G005500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 427186-429185 Phaseolus vulgaris
Phvul.007G005500 2.0kb downstream 2.0kb downstream 10882 true Chr07: 416304-427185 Phaseolus vulgaris
Phvul.007G005500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 416304-418303 Phaseolus vulgaris
Phvul.007G005500 5.0kb upstream 5.0kb upstream 13882 true Chr07: 418304-432185 Phaseolus vulgaris
Phvul.007G005500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 427186-432185 Phaseolus vulgaris
Phvul.007G005500 5.0kb downstream 5.0kb downstream 13882 true Chr07: 413304-427185 Phaseolus vulgaris
Phvul.007G005500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 413304-418303 Phaseolus vulgaris
Phvul.007G005500 10.0kb upstream 10.0kb upstream 18882 true Chr07: 418304-437185 Phaseolus vulgaris
Phvul.007G005500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 427186-437185 Phaseolus vulgaris
Phvul.007G005500 10.0kb downstream 10.0kb downstream 18882 true Chr07: 408304-427185 Phaseolus vulgaris
Phvul.007G005500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 408304-418303 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300912 5265 Fabidae View MSA
124063524 5270 Rosid View MSA
123740176 5271 Pentapetalae View MSA
122795755 5272 Eudicot View MSA
122044400 5273 Angiosperm View MSA
121345248 5274 Embryophyte View MSA
123428184 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.6698 0.0 10.0501   Low
cufflinks 13.443 0.0 34.7874    
cufflinks 22.5797 0.0 59.6513    
cufflinks 12.7062 0.0 32.8437    
cufflinks 17.6521 0.0 45.8988    
cufflinks 21.2101 0.0 55.8179    
cufflinks 24.3605 0.0 64.7961    
cufflinks 32.9511 0.0 89.9863 High High
cufflinks 23.3115 0.0 61.7572    
cufflinks 16.797 0.0 43.6754    
cufflinks 17.3234 0.0 45.0738    

0 Strain