Gene : Phvul.004G045800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR22952:SF201 - BASIC LEUCINE-ZIPPER 42-RELATED Genomic Order:  492
Name:  ? Phvul.004G045800 Secondary Identifier:  ? PAC:37163674
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G045800 0.5kb upstream 0.5kb upstream 1556 true Chr04: 5468505-5470060 Phaseolus vulgaris
Phvul.004G045800 0.5kb upstream 0.5kb upstream 500 false Chr04: 5468505-5469004 Phaseolus vulgaris
Phvul.004G045800 0.5kb downstream 0.5kb downstream 1556 true Chr04: 5469005-5470560 Phaseolus vulgaris
Phvul.004G045800 0.5kb downstream 0.5kb downstream 500 false Chr04: 5470061-5470560 Phaseolus vulgaris
Phvul.004G045800 1.0kb upstream 1.0kb upstream 2056 true Chr04: 5468005-5470060 Phaseolus vulgaris
Phvul.004G045800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 5468005-5469004 Phaseolus vulgaris
Phvul.004G045800 1.0kb downstream 1.0kb downstream 2056 true Chr04: 5469005-5471060 Phaseolus vulgaris
Phvul.004G045800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 5470061-5471060 Phaseolus vulgaris
Phvul.004G045800 2.0kb upstream 2.0kb upstream 3056 true Chr04: 5467005-5470060 Phaseolus vulgaris
Phvul.004G045800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 5467005-5469004 Phaseolus vulgaris
Phvul.004G045800 2.0kb downstream 2.0kb downstream 3056 true Chr04: 5469005-5472060 Phaseolus vulgaris
Phvul.004G045800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 5470061-5472060 Phaseolus vulgaris
Phvul.004G045800 5.0kb upstream 5.0kb upstream 6056 true Chr04: 5464005-5470060 Phaseolus vulgaris
Phvul.004G045800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 5464005-5469004 Phaseolus vulgaris
Phvul.004G045800 5.0kb downstream 5.0kb downstream 6056 true Chr04: 5469005-5475060 Phaseolus vulgaris
Phvul.004G045800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 5470061-5475060 Phaseolus vulgaris
Phvul.004G045800 10.0kb upstream 10.0kb upstream 11056 true Chr04: 5459005-5470060 Phaseolus vulgaris
Phvul.004G045800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 5459005-5469004 Phaseolus vulgaris
Phvul.004G045800 10.0kb downstream 10.0kb downstream 11056 true Chr04: 5469005-5480060 Phaseolus vulgaris
Phvul.004G045800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 5470061-5480060 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313082 5265 Fabidae View MSA
124069862 5270 Rosid View MSA
123747742 5271 Pentapetalae View MSA
122794625 5272 Eudicot View MSA
122049154 5273 Angiosperm View MSA
123428996 5275 Viridiplantae View MSA
121349851 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.9021 0.0 61.4141   High
cufflinks 1.21917 0.0 4.44256    
cufflinks 0.960576 0.0 3.56359    
cufflinks 79.1891 0.0 206.199 High High
cufflinks 11.5744 0.0 33.0278    
cufflinks 0.731042 0.0 2.77986   Low
cufflinks 4.20922 0.0 13.3486    
cufflinks 6.81278 0.0 20.5291    
cufflinks 3.5612 0.0 11.4875    
cufflinks 0.609339 0.0 2.35674   Low
cufflinks 14.1102 0.0 39.5458    

0 Strain