Gene : Phvul.004G046300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR33228:SF3 - PROTEIN GLUTAMINE DUMPER 7 Genomic Order:  497
Name:  ? Phvul.004G046300 Secondary Identifier:  ? PAC:37163496
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G046300 0.5kb upstream 0.5kb upstream 944 true Chr04: 5512773-5513716 Phaseolus vulgaris
Phvul.004G046300 0.5kb upstream 0.5kb upstream 500 false Chr04: 5513217-5513716 Phaseolus vulgaris
Phvul.004G046300 0.5kb downstream 0.5kb downstream 944 true Chr04: 5512273-5513216 Phaseolus vulgaris
Phvul.004G046300 0.5kb downstream 0.5kb downstream 500 false Chr04: 5512273-5512772 Phaseolus vulgaris
Phvul.004G046300 1.0kb upstream 1.0kb upstream 1444 true Chr04: 5512773-5514216 Phaseolus vulgaris
Phvul.004G046300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 5513217-5514216 Phaseolus vulgaris
Phvul.004G046300 1.0kb downstream 1.0kb downstream 1444 true Chr04: 5511773-5513216 Phaseolus vulgaris
Phvul.004G046300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 5511773-5512772 Phaseolus vulgaris
Phvul.004G046300 2.0kb upstream 2.0kb upstream 2444 true Chr04: 5512773-5515216 Phaseolus vulgaris
Phvul.004G046300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 5513217-5515216 Phaseolus vulgaris
Phvul.004G046300 2.0kb downstream 2.0kb downstream 2444 true Chr04: 5510773-5513216 Phaseolus vulgaris
Phvul.004G046300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 5510773-5512772 Phaseolus vulgaris
Phvul.004G046300 5.0kb upstream 5.0kb upstream 5444 true Chr04: 5512773-5518216 Phaseolus vulgaris
Phvul.004G046300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 5513217-5518216 Phaseolus vulgaris
Phvul.004G046300 5.0kb downstream 5.0kb downstream 5444 true Chr04: 5507773-5513216 Phaseolus vulgaris
Phvul.004G046300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 5507773-5512772 Phaseolus vulgaris
Phvul.004G046300 10.0kb upstream 10.0kb upstream 10444 true Chr04: 5512773-5523216 Phaseolus vulgaris
Phvul.004G046300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 5513217-5523216 Phaseolus vulgaris
Phvul.004G046300 10.0kb downstream 10.0kb downstream 10444 true Chr04: 5502773-5513216 Phaseolus vulgaris
Phvul.004G046300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 5502773-5512772 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313286 5265 Fabidae View MSA
124071582 5270 Rosid View MSA
123752792 5271 Pentapetalae View MSA
122796809 5272 Eudicot View MSA
122048439 5273 Angiosperm View MSA
121310974 5274 Embryophyte View MSA
123348338 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.160748 0.0 0.796667 Low Low
cufflinks 0.884087 0.0 3.6889    
cufflinks 1.60708 0.0 6.37838    
cufflinks 0.570583 0.0 2.47431    
cufflinks 3.37428 0.0 12.7329   High
cufflinks 0.400345 0.0 1.79674 Low  
cufflinks 2.09556 0.0 8.15772    
cufflinks 1.26877 0.0 5.12742    
cufflinks 4.53466 0.0 16.5757   High
cufflinks 0.427247 0.0 1.91588    
cufflinks 1.63383 0.0 6.50961    

0 Strain