Gene : Phvul.004G047000 P. vulgaris v2.1
Defline:  (1 of 6) 1.1.1.39 - Malate dehydrogenase (decarboxylating) / Pyruvic-malic carboxylase Genomic Order:  504
Name:  ? Phvul.004G047000 Secondary Identifier:  ? PAC:37162664
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris GLUCONEO-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-7115 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G047000 0.5kb upstream 0.5kb upstream 1184 true Chr04: 5709200-5710383 Phaseolus vulgaris
Phvul.004G047000 0.5kb upstream 0.5kb upstream 500 false Chr04: 5709884-5710383 Phaseolus vulgaris
Phvul.004G047000 0.5kb downstream 0.5kb downstream 1184 true Chr04: 5708700-5709883 Phaseolus vulgaris
Phvul.004G047000 0.5kb downstream 0.5kb downstream 500 false Chr04: 5708700-5709199 Phaseolus vulgaris
Phvul.004G047000 1.0kb upstream 1.0kb upstream 1684 true Chr04: 5709200-5710883 Phaseolus vulgaris
Phvul.004G047000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 5709884-5710883 Phaseolus vulgaris
Phvul.004G047000 1.0kb downstream 1.0kb downstream 1684 true Chr04: 5708200-5709883 Phaseolus vulgaris
Phvul.004G047000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 5708200-5709199 Phaseolus vulgaris
Phvul.004G047000 2.0kb upstream 2.0kb upstream 2684 true Chr04: 5709200-5711883 Phaseolus vulgaris
Phvul.004G047000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 5709884-5711883 Phaseolus vulgaris
Phvul.004G047000 2.0kb downstream 2.0kb downstream 2684 true Chr04: 5707200-5709883 Phaseolus vulgaris
Phvul.004G047000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 5707200-5709199 Phaseolus vulgaris
Phvul.004G047000 5.0kb upstream 5.0kb upstream 5684 true Chr04: 5709200-5714883 Phaseolus vulgaris
Phvul.004G047000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 5709884-5714883 Phaseolus vulgaris
Phvul.004G047000 5.0kb downstream 5.0kb downstream 5684 true Chr04: 5704200-5709883 Phaseolus vulgaris
Phvul.004G047000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 5704200-5709199 Phaseolus vulgaris
Phvul.004G047000 10.0kb upstream 10.0kb upstream 10684 true Chr04: 5709200-5719883 Phaseolus vulgaris
Phvul.004G047000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 5709884-5719883 Phaseolus vulgaris
Phvul.004G047000 10.0kb downstream 10.0kb downstream 10684 true Chr04: 5699200-5709883 Phaseolus vulgaris
Phvul.004G047000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 5699200-5709199 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315337 5265 Fabidae View MSA
124073264 5270 Rosid View MSA
123749202 5271 Pentapetalae View MSA
122796678 5272 Eudicot View MSA
122050999 5273 Angiosperm View MSA
121350297 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.78562 0.0 15.1968    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 36.1945 0.0 117.066 High  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain