Gene : Phvul.004G030500 P. vulgaris v2.1
Defline:  (1 of 37) PF01357//PF03330 - Pollen allergen (Pollen_allerg_1) // Rare lipoprotein A (RlpA)-like double-psi beta-barrel (DPBB_1) Genomic Order:  343
Name:  ? Phvul.004G030500 Secondary Identifier:  ? PAC:37161936
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G030500 0.5kb upstream 0.5kb upstream 2596 true Chr04: 3632408-3635003 Phaseolus vulgaris
Phvul.004G030500 0.5kb upstream 0.5kb upstream 500 false Chr04: 3632408-3632907 Phaseolus vulgaris
Phvul.004G030500 0.5kb downstream 0.5kb downstream 2596 true Chr04: 3632908-3635503 Phaseolus vulgaris
Phvul.004G030500 0.5kb downstream 0.5kb downstream 500 false Chr04: 3635004-3635503 Phaseolus vulgaris
Phvul.004G030500 1.0kb upstream 1.0kb upstream 3096 true Chr04: 3631908-3635003 Phaseolus vulgaris
Phvul.004G030500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 3631908-3632907 Phaseolus vulgaris
Phvul.004G030500 1.0kb downstream 1.0kb downstream 3096 true Chr04: 3632908-3636003 Phaseolus vulgaris
Phvul.004G030500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 3635004-3636003 Phaseolus vulgaris
Phvul.004G030500 2.0kb upstream 2.0kb upstream 4096 true Chr04: 3630908-3635003 Phaseolus vulgaris
Phvul.004G030500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 3630908-3632907 Phaseolus vulgaris
Phvul.004G030500 2.0kb downstream 2.0kb downstream 4096 true Chr04: 3632908-3637003 Phaseolus vulgaris
Phvul.004G030500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 3635004-3637003 Phaseolus vulgaris
Phvul.004G030500 5.0kb upstream 5.0kb upstream 7096 true Chr04: 3627908-3635003 Phaseolus vulgaris
Phvul.004G030500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 3627908-3632907 Phaseolus vulgaris
Phvul.004G030500 5.0kb downstream 5.0kb downstream 7096 true Chr04: 3632908-3640003 Phaseolus vulgaris
Phvul.004G030500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 3635004-3640003 Phaseolus vulgaris
Phvul.004G030500 10.0kb upstream 10.0kb upstream 12096 true Chr04: 3622908-3635003 Phaseolus vulgaris
Phvul.004G030500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 3622908-3632907 Phaseolus vulgaris
Phvul.004G030500 10.0kb downstream 10.0kb downstream 12096 true Chr04: 3632908-3645003 Phaseolus vulgaris
Phvul.004G030500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 3635004-3645003 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310156 5265 Fabidae View MSA
124070528 5270 Rosid View MSA
123753539 5271 Pentapetalae View MSA
122795213 5272 Eudicot View MSA
122043079 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121351680 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.9461 0.0 49.8426    
cufflinks 88.6681 0.0 238.837 High  
cufflinks 37.1624 0.0 96.0953    
cufflinks 226.339 0.0 674.537 High High
cufflinks 16.7736 0.0 44.494    
cufflinks 30.3292 0.0 78.4499    
cufflinks 1.30078 0.0 4.48307   Low
cufflinks 6.00382 0.0 17.3405    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 16.3864 0.0 43.5114    
cufflinks 30.1216 0.0 77.9714    

0 Strain