Gene : Phvul.004G033600 P. vulgaris v2.1
Defline:  (1 of 3) PTHR33349:SF1 - CALMODULIN-BINDING PROTEIN-LIKE PROTEIN Genomic Order:  371
Name:  ? Phvul.004G033600 Secondary Identifier:  ? PAC:37162237
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G033600 0.5kb upstream 0.5kb upstream 4310 true Chr04: 3941499-3945808 Phaseolus vulgaris
Phvul.004G033600 0.5kb upstream 0.5kb upstream 500 false Chr04: 3941499-3941998 Phaseolus vulgaris
Phvul.004G033600 0.5kb downstream 0.5kb downstream 4310 true Chr04: 3941999-3946308 Phaseolus vulgaris
Phvul.004G033600 0.5kb downstream 0.5kb downstream 500 false Chr04: 3945809-3946308 Phaseolus vulgaris
Phvul.004G033600 1.0kb upstream 1.0kb upstream 4810 true Chr04: 3940999-3945808 Phaseolus vulgaris
Phvul.004G033600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 3940999-3941998 Phaseolus vulgaris
Phvul.004G033600 1.0kb downstream 1.0kb downstream 4810 true Chr04: 3941999-3946808 Phaseolus vulgaris
Phvul.004G033600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 3945809-3946808 Phaseolus vulgaris
Phvul.004G033600 2.0kb upstream 2.0kb upstream 5810 true Chr04: 3939999-3945808 Phaseolus vulgaris
Phvul.004G033600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 3939999-3941998 Phaseolus vulgaris
Phvul.004G033600 2.0kb downstream 2.0kb downstream 5810 true Chr04: 3941999-3947808 Phaseolus vulgaris
Phvul.004G033600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 3945809-3947808 Phaseolus vulgaris
Phvul.004G033600 5.0kb upstream 5.0kb upstream 8810 true Chr04: 3936999-3945808 Phaseolus vulgaris
Phvul.004G033600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 3936999-3941998 Phaseolus vulgaris
Phvul.004G033600 5.0kb downstream 5.0kb downstream 8810 true Chr04: 3941999-3950808 Phaseolus vulgaris
Phvul.004G033600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 3945809-3950808 Phaseolus vulgaris
Phvul.004G033600 10.0kb upstream 10.0kb upstream 13810 true Chr04: 3931999-3945808 Phaseolus vulgaris
Phvul.004G033600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 3931999-3941998 Phaseolus vulgaris
Phvul.004G033600 10.0kb downstream 10.0kb downstream 13810 true Chr04: 3941999-3955808 Phaseolus vulgaris
Phvul.004G033600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 3945809-3955808 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306349 5265 Fabidae View MSA
124071368 5270 Rosid View MSA
123747266 5271 Pentapetalae View MSA
122791700 5272 Eudicot View MSA
122049336 5273 Angiosperm View MSA
121311351 5274 Embryophyte View MSA
123348657 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.81212 0.0 27.1329   High
cufflinks 2.71433 0.0 10.1098   Low
cufflinks 3.82693 0.0 13.1324    
cufflinks 2.78896 0.0 10.4088   Low
cufflinks 3.57281 0.0 12.7161    
cufflinks 7.98143 0.0 27.7288   High
cufflinks 4.06772 0.0 13.7767    
cufflinks 7.92865 0.0 24.0226   High
cufflinks 4.54473 0.0 15.0076    
cufflinks 5.36892 0.0 20.2107    
cufflinks 4.00208 0.0 13.7463    

0 Strain