Gene : Phvul.004G034000 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11638:SF121 - CHAPERONE PROTEIN CLPB3, CHLOROPLASTIC Genomic Order:  375
Name:  ? Phvul.004G034000 Secondary Identifier:  ? PAC:37162003
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G034000 0.5kb upstream 0.5kb upstream 8699 true Chr04: 3967432-3976130 Phaseolus vulgaris
Phvul.004G034000 0.5kb upstream 0.5kb upstream 500 false Chr04: 3975631-3976130 Phaseolus vulgaris
Phvul.004G034000 0.5kb downstream 0.5kb downstream 8699 true Chr04: 3966932-3975630 Phaseolus vulgaris
Phvul.004G034000 0.5kb downstream 0.5kb downstream 500 false Chr04: 3966932-3967431 Phaseolus vulgaris
Phvul.004G034000 1.0kb upstream 1.0kb upstream 9199 true Chr04: 3967432-3976630 Phaseolus vulgaris
Phvul.004G034000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 3975631-3976630 Phaseolus vulgaris
Phvul.004G034000 1.0kb downstream 1.0kb downstream 9199 true Chr04: 3966432-3975630 Phaseolus vulgaris
Phvul.004G034000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 3966432-3967431 Phaseolus vulgaris
Phvul.004G034000 2.0kb upstream 2.0kb upstream 10199 true Chr04: 3967432-3977630 Phaseolus vulgaris
Phvul.004G034000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 3975631-3977630 Phaseolus vulgaris
Phvul.004G034000 2.0kb downstream 2.0kb downstream 10199 true Chr04: 3965432-3975630 Phaseolus vulgaris
Phvul.004G034000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 3965432-3967431 Phaseolus vulgaris
Phvul.004G034000 5.0kb upstream 5.0kb upstream 13199 true Chr04: 3967432-3980630 Phaseolus vulgaris
Phvul.004G034000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 3975631-3980630 Phaseolus vulgaris
Phvul.004G034000 5.0kb downstream 5.0kb downstream 13199 true Chr04: 3962432-3975630 Phaseolus vulgaris
Phvul.004G034000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 3962432-3967431 Phaseolus vulgaris
Phvul.004G034000 10.0kb upstream 10.0kb upstream 18199 true Chr04: 3967432-3985630 Phaseolus vulgaris
Phvul.004G034000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 3975631-3985630 Phaseolus vulgaris
Phvul.004G034000 10.0kb downstream 10.0kb downstream 18199 true Chr04: 3957432-3975630 Phaseolus vulgaris
Phvul.004G034000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 3957432-3967431 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296233 5265 Fabidae View MSA
124035570 5270 Rosid View MSA
123743206 5271 Pentapetalae View MSA
122792663 5272 Eudicot View MSA
122044164 5273 Angiosperm View MSA
121345857 5274 Embryophyte View MSA
123426722 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.3458 0.0 31.9228    
cufflinks 6.35785 0.0 16.6893    
cufflinks 64.9186 0.0 191.641 High High
cufflinks 4.28189 0.0 11.6076    
cufflinks 5.1492 0.0 13.7846    
cufflinks 16.3532 0.0 42.5375    
cufflinks 2.52069 0.0 7.11968   Low
cufflinks 2.67974 0.0 7.5094    
cufflinks 2.91933 0.0 8.14521    
cufflinks 20.6614 0.0 54.2215   High
cufflinks 4.34762 0.0 11.7657    

0 Strain