Gene : Phvul.004G032600 P. vulgaris v2.1
Defline:  (1 of 1) K10903 - HUS1 checkpoint protein (HUS1) Genomic Order:  363
Name:  ? Phvul.004G032600 Secondary Identifier:  ? PAC:37162979
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G032600 0.5kb upstream 0.5kb upstream 2403 true Chr04: 3882254-3884656 Phaseolus vulgaris
Phvul.004G032600 0.5kb upstream 0.5kb upstream 500 false Chr04: 3882254-3882753 Phaseolus vulgaris
Phvul.004G032600 0.5kb downstream 0.5kb downstream 2403 true Chr04: 3882754-3885156 Phaseolus vulgaris
Phvul.004G032600 0.5kb downstream 0.5kb downstream 500 false Chr04: 3884657-3885156 Phaseolus vulgaris
Phvul.004G032600 1.0kb upstream 1.0kb upstream 2903 true Chr04: 3881754-3884656 Phaseolus vulgaris
Phvul.004G032600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 3881754-3882753 Phaseolus vulgaris
Phvul.004G032600 1.0kb downstream 1.0kb downstream 2903 true Chr04: 3882754-3885656 Phaseolus vulgaris
Phvul.004G032600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 3884657-3885656 Phaseolus vulgaris
Phvul.004G032600 2.0kb upstream 2.0kb upstream 3903 true Chr04: 3880754-3884656 Phaseolus vulgaris
Phvul.004G032600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 3880754-3882753 Phaseolus vulgaris
Phvul.004G032600 2.0kb downstream 2.0kb downstream 3903 true Chr04: 3882754-3886656 Phaseolus vulgaris
Phvul.004G032600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 3884657-3886656 Phaseolus vulgaris
Phvul.004G032600 5.0kb upstream 5.0kb upstream 6903 true Chr04: 3877754-3884656 Phaseolus vulgaris
Phvul.004G032600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 3877754-3882753 Phaseolus vulgaris
Phvul.004G032600 5.0kb downstream 5.0kb downstream 6903 true Chr04: 3882754-3889656 Phaseolus vulgaris
Phvul.004G032600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 3884657-3889656 Phaseolus vulgaris
Phvul.004G032600 10.0kb upstream 10.0kb upstream 11903 true Chr04: 3872754-3884656 Phaseolus vulgaris
Phvul.004G032600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 3872754-3882753 Phaseolus vulgaris
Phvul.004G032600 10.0kb downstream 10.0kb downstream 11903 true Chr04: 3882754-3894656 Phaseolus vulgaris
Phvul.004G032600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 3884657-3894656 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304256 5265 Fabidae View MSA
124067881 5270 Rosid View MSA
123737644 5271 Pentapetalae View MSA
122786635 5272 Eudicot View MSA
122044274 5273 Angiosperm View MSA
121346452 5274 Embryophyte View MSA
123425931 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.85299 0.0 9.18839    
cufflinks 4.46997 0.0 13.6789   High
cufflinks 1.73171 0.0 5.95003   Low
cufflinks 2.46637 0.0 7.95926    
cufflinks 2.61453 0.0 8.44726    
cufflinks 1.89894 0.0 6.42503    
cufflinks 3.25035 0.0 10.2295    
cufflinks 2.37765 0.0 7.84441    
cufflinks 1.84724 0.0 6.20179   Low
cufflinks 2.47302 0.0 8.07693    
cufflinks 2.35181 0.0 7.67864    

0 Strain