Gene : Phvul.004G034300 P. vulgaris v2.1
Defline:  (1 of 3) K02160 - acetyl-CoA carboxylase biotin carboxyl carrier protein (accB, bccP) Genomic Order:  378
Name:  ? Phvul.004G034300 Secondary Identifier:  ? PAC:37161871
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY0-1264 Phaseolus vulgaris pathologic  
Pvulgaris PWY-4381 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5156 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7388 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G034300 0.5kb upstream 0.5kb upstream 4382 true Chr04: 3999142-4003523 Phaseolus vulgaris
Phvul.004G034300 0.5kb upstream 0.5kb upstream 500 false Chr04: 4003024-4003523 Phaseolus vulgaris
Phvul.004G034300 0.5kb downstream 0.5kb downstream 4382 true Chr04: 3998642-4003023 Phaseolus vulgaris
Phvul.004G034300 0.5kb downstream 0.5kb downstream 500 false Chr04: 3998642-3999141 Phaseolus vulgaris
Phvul.004G034300 1.0kb upstream 1.0kb upstream 4882 true Chr04: 3999142-4004023 Phaseolus vulgaris
Phvul.004G034300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 4003024-4004023 Phaseolus vulgaris
Phvul.004G034300 1.0kb downstream 1.0kb downstream 4882 true Chr04: 3998142-4003023 Phaseolus vulgaris
Phvul.004G034300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 3998142-3999141 Phaseolus vulgaris
Phvul.004G034300 2.0kb upstream 2.0kb upstream 5882 true Chr04: 3999142-4005023 Phaseolus vulgaris
Phvul.004G034300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 4003024-4005023 Phaseolus vulgaris
Phvul.004G034300 2.0kb downstream 2.0kb downstream 5882 true Chr04: 3997142-4003023 Phaseolus vulgaris
Phvul.004G034300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 3997142-3999141 Phaseolus vulgaris
Phvul.004G034300 5.0kb upstream 5.0kb upstream 8882 true Chr04: 3999142-4008023 Phaseolus vulgaris
Phvul.004G034300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 4003024-4008023 Phaseolus vulgaris
Phvul.004G034300 5.0kb downstream 5.0kb downstream 8882 true Chr04: 3994142-4003023 Phaseolus vulgaris
Phvul.004G034300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 3994142-3999141 Phaseolus vulgaris
Phvul.004G034300 10.0kb upstream 10.0kb upstream 13882 true Chr04: 3999142-4013023 Phaseolus vulgaris
Phvul.004G034300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 4003024-4013023 Phaseolus vulgaris
Phvul.004G034300 10.0kb downstream 10.0kb downstream 13882 true Chr04: 3989142-4003023 Phaseolus vulgaris
Phvul.004G034300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 3989142-3999141 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311832 5265 Fabidae View MSA
124069770 5270 Rosid View MSA
123741689 5271 Pentapetalae View MSA
122795242 5272 Eudicot View MSA
122043144 5273 Angiosperm View MSA
121346326 5274 Embryophyte View MSA
123424113 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.51444 0.0 24.2851    
cufflinks 12.8502 0.0 35.2676    
cufflinks 14.5954 0.0 39.4592    
cufflinks 37.1802 0.0 96.1494 High High
cufflinks 16.6273 0.0 44.7605    
cufflinks 13.3422 0.0 36.4375    
cufflinks 7.32596 0.0 21.1373    
cufflinks 7.22487 0.0 20.8451    
cufflinks 15.9233 0.0 42.8602    
cufflinks 5.52444 0.0 16.5414   Low
cufflinks 15.2047 0.0 41.2578    

0 Strain