Gene : Phvul.004G019300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR32285:SF28 - PROTEIN ALTERED XYLOGLUCAN 4-LIKE Genomic Order:  230
Name:  ? Phvul.004G019300 Secondary Identifier:  ? PAC:37162148
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G019300 0.5kb upstream 0.5kb upstream 5958 true Chr04: 2265651-2271608 Phaseolus vulgaris
Phvul.004G019300 0.5kb upstream 0.5kb upstream 500 false Chr04: 2271109-2271608 Phaseolus vulgaris
Phvul.004G019300 0.5kb downstream 0.5kb downstream 5958 true Chr04: 2265151-2271108 Phaseolus vulgaris
Phvul.004G019300 0.5kb downstream 0.5kb downstream 500 false Chr04: 2265151-2265650 Phaseolus vulgaris
Phvul.004G019300 1.0kb upstream 1.0kb upstream 6458 true Chr04: 2265651-2272108 Phaseolus vulgaris
Phvul.004G019300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 2271109-2272108 Phaseolus vulgaris
Phvul.004G019300 1.0kb downstream 1.0kb downstream 6458 true Chr04: 2264651-2271108 Phaseolus vulgaris
Phvul.004G019300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 2264651-2265650 Phaseolus vulgaris
Phvul.004G019300 2.0kb upstream 2.0kb upstream 7458 true Chr04: 2265651-2273108 Phaseolus vulgaris
Phvul.004G019300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 2271109-2273108 Phaseolus vulgaris
Phvul.004G019300 2.0kb downstream 2.0kb downstream 7458 true Chr04: 2263651-2271108 Phaseolus vulgaris
Phvul.004G019300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 2263651-2265650 Phaseolus vulgaris
Phvul.004G019300 5.0kb upstream 5.0kb upstream 10458 true Chr04: 2265651-2276108 Phaseolus vulgaris
Phvul.004G019300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 2271109-2276108 Phaseolus vulgaris
Phvul.004G019300 5.0kb downstream 5.0kb downstream 10458 true Chr04: 2260651-2271108 Phaseolus vulgaris
Phvul.004G019300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 2260651-2265650 Phaseolus vulgaris
Phvul.004G019300 10.0kb upstream 10.0kb upstream 15458 true Chr04: 2265651-2281108 Phaseolus vulgaris
Phvul.004G019300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 2271109-2281108 Phaseolus vulgaris
Phvul.004G019300 10.0kb downstream 10.0kb downstream 15458 true Chr04: 2255651-2271108 Phaseolus vulgaris
Phvul.004G019300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 2255651-2265650 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307496 5265 Fabidae View MSA
124066209 5270 Rosid View MSA
123753462 5271 Pentapetalae View MSA
122797188 5272 Eudicot View MSA
122050805 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121350671 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.72291 0.0 3.06037    
cufflinks 1.5169 0.0 5.29442   High
cufflinks 0.727169 0.0 3.02316    
cufflinks 1.96223 0.0 8.40475   High
cufflinks 0.341948 0.0 1.58661 Low Low
cufflinks 0.917367 0.0 3.65384    
cufflinks 0.342539 0.0 1.55629 Low Low
cufflinks 0.395334 0.0 1.80583 Low  
cufflinks 0.336051 0.0 1.53831 Low Low
cufflinks 0.810603 0.0 4.32514    
cufflinks 0.840512 0.0 3.4305    

0 Strain