Gene : Phvul.004G023300 P. vulgaris v2.1
Genomic Order:  269 Name:  ? Phvul.004G023300
Secondary Identifier:  ? PAC:37162174
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G023300 0.5kb upstream 0.5kb upstream 1310 true Chr04: 2693131-2694440 Phaseolus vulgaris
Phvul.004G023300 0.5kb upstream 0.5kb upstream 500 false Chr04: 2693941-2694440 Phaseolus vulgaris
Phvul.004G023300 0.5kb downstream 0.5kb downstream 1310 true Chr04: 2692631-2693940 Phaseolus vulgaris
Phvul.004G023300 0.5kb downstream 0.5kb downstream 500 false Chr04: 2692631-2693130 Phaseolus vulgaris
Phvul.004G023300 1.0kb upstream 1.0kb upstream 1810 true Chr04: 2693131-2694940 Phaseolus vulgaris
Phvul.004G023300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 2693941-2694940 Phaseolus vulgaris
Phvul.004G023300 1.0kb downstream 1.0kb downstream 1810 true Chr04: 2692131-2693940 Phaseolus vulgaris
Phvul.004G023300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 2692131-2693130 Phaseolus vulgaris
Phvul.004G023300 2.0kb upstream 2.0kb upstream 2810 true Chr04: 2693131-2695940 Phaseolus vulgaris
Phvul.004G023300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 2693941-2695940 Phaseolus vulgaris
Phvul.004G023300 2.0kb downstream 2.0kb downstream 2810 true Chr04: 2691131-2693940 Phaseolus vulgaris
Phvul.004G023300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 2691131-2693130 Phaseolus vulgaris
Phvul.004G023300 5.0kb upstream 5.0kb upstream 5810 true Chr04: 2693131-2698940 Phaseolus vulgaris
Phvul.004G023300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 2693941-2698940 Phaseolus vulgaris
Phvul.004G023300 5.0kb downstream 5.0kb downstream 5810 true Chr04: 2688131-2693940 Phaseolus vulgaris
Phvul.004G023300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 2688131-2693130 Phaseolus vulgaris
Phvul.004G023300 10.0kb upstream 10.0kb upstream 10810 true Chr04: 2693131-2703940 Phaseolus vulgaris
Phvul.004G023300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 2693941-2703940 Phaseolus vulgaris
Phvul.004G023300 10.0kb downstream 10.0kb downstream 10810 true Chr04: 2683131-2693940 Phaseolus vulgaris
Phvul.004G023300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 2683131-2693130 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791781 5273 Angiosperm View MSA
122302578 5265 Fabidae View MSA
124050495 5270 Rosid View MSA
123741246 5271 Pentapetalae View MSA
122792115 5272 Eudicot View MSA
121063071 5274 Embryophyte View MSA
123102856 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.44692 0.0 11.3372    
cufflinks 5.23255 0.0 16.3025    
cufflinks 5.707 0.0 17.5618    
cufflinks 1.46792 0.0 5.30157    
cufflinks 6.20165 0.0 19.17    
cufflinks 9.28804 0.0 27.0457   High
cufflinks 1.70242 0.0 5.96984    
cufflinks 0.638917 0.0 2.44593   Low
cufflinks 1.3813 0.0 4.94719    
cufflinks 0.65137 0.0 2.51239   Low
cufflinks 7.37783 0.0 22.1275   High

0 Strain