Gene : Phvul.004G023400 P. vulgaris v2.1
Genomic Order:  270 Name:  ? Phvul.004G023400
Secondary Identifier:  ? PAC:37162920
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G023400 0.5kb upstream 0.5kb upstream 6087 true Chr04: 2705964-2712050 Phaseolus vulgaris
Phvul.004G023400 0.5kb upstream 0.5kb upstream 500 false Chr04: 2711551-2712050 Phaseolus vulgaris
Phvul.004G023400 0.5kb downstream 0.5kb downstream 6087 true Chr04: 2705464-2711550 Phaseolus vulgaris
Phvul.004G023400 0.5kb downstream 0.5kb downstream 500 false Chr04: 2705464-2705963 Phaseolus vulgaris
Phvul.004G023400 1.0kb upstream 1.0kb upstream 6587 true Chr04: 2705964-2712550 Phaseolus vulgaris
Phvul.004G023400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 2711551-2712550 Phaseolus vulgaris
Phvul.004G023400 1.0kb downstream 1.0kb downstream 6587 true Chr04: 2704964-2711550 Phaseolus vulgaris
Phvul.004G023400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 2704964-2705963 Phaseolus vulgaris
Phvul.004G023400 2.0kb upstream 2.0kb upstream 7587 true Chr04: 2705964-2713550 Phaseolus vulgaris
Phvul.004G023400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 2711551-2713550 Phaseolus vulgaris
Phvul.004G023400 2.0kb downstream 2.0kb downstream 7587 true Chr04: 2703964-2711550 Phaseolus vulgaris
Phvul.004G023400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 2703964-2705963 Phaseolus vulgaris
Phvul.004G023400 5.0kb upstream 5.0kb upstream 10587 true Chr04: 2705964-2716550 Phaseolus vulgaris
Phvul.004G023400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 2711551-2716550 Phaseolus vulgaris
Phvul.004G023400 5.0kb downstream 5.0kb downstream 10587 true Chr04: 2700964-2711550 Phaseolus vulgaris
Phvul.004G023400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 2700964-2705963 Phaseolus vulgaris
Phvul.004G023400 10.0kb upstream 10.0kb upstream 15587 true Chr04: 2705964-2721550 Phaseolus vulgaris
Phvul.004G023400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 2711551-2721550 Phaseolus vulgaris
Phvul.004G023400 10.0kb downstream 10.0kb downstream 15587 true Chr04: 2695964-2711550 Phaseolus vulgaris
Phvul.004G023400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 2695964-2705963 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315304 5265 Fabidae View MSA
124067011 5270 Rosid View MSA
123747126 5271 Pentapetalae View MSA
122796544 5272 Eudicot View MSA
122049589 5273 Angiosperm View MSA
121350922 5274 Embryophyte View MSA
123381938 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.558443 0.0 2.01652    
cufflinks 1.64571 0.0 5.28762   High
cufflinks 1.01749 0.0 3.4378    
cufflinks 0.24301 0.0 0.949107 Low Low
cufflinks 0.878843 0.0 3.07006    
cufflinks 1.4512 0.0 4.72613    
cufflinks 1.32388 0.0 4.35404    
cufflinks 1.22689 0.0 4.03791    
cufflinks 0.981877 0.0 3.34777    
cufflinks 0.773724 0.0 2.71282    
cufflinks 1.07124 0.0 3.64665    

0 Strain