Gene : Phvul.004G023500 P. vulgaris v2.1
Defline:  (1 of 4) 5.3.1.9 - Glucose-6-phosphate isomerase / Phosphosaccharomutase Genomic Order:  271
Name:  ? Phvul.004G023500 Secondary Identifier:  ? PAC:37163078
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Sequence Feature Displayer

Ontology Annotation Displayer

9 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris ANAEROFRUCAT-PWY Phaseolus vulgaris pathologic  
Pvulgaris ANAGLYCOLYSIS-PWY Phaseolus vulgaris pathologic  
Pvulgaris GLUCONEO-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-3801 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5659 Phaseolus vulgaris pathologic  
Pvulgaris PWY-621 Phaseolus vulgaris pathologic  
Pvulgaris PWY-622 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7238 Phaseolus vulgaris pathologic  
Pvulgaris SUCSYN-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G023500 0.5kb upstream 0.5kb upstream 10325 true Chr04: 2714877-2725201 Phaseolus vulgaris
Phvul.004G023500 0.5kb upstream 0.5kb upstream 500 false Chr04: 2724702-2725201 Phaseolus vulgaris
Phvul.004G023500 0.5kb downstream 0.5kb downstream 10325 true Chr04: 2714377-2724701 Phaseolus vulgaris
Phvul.004G023500 0.5kb downstream 0.5kb downstream 500 false Chr04: 2714377-2714876 Phaseolus vulgaris
Phvul.004G023500 1.0kb upstream 1.0kb upstream 10825 true Chr04: 2714877-2725701 Phaseolus vulgaris
Phvul.004G023500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 2724702-2725701 Phaseolus vulgaris
Phvul.004G023500 1.0kb downstream 1.0kb downstream 10825 true Chr04: 2713877-2724701 Phaseolus vulgaris
Phvul.004G023500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 2713877-2714876 Phaseolus vulgaris
Phvul.004G023500 2.0kb upstream 2.0kb upstream 11825 true Chr04: 2714877-2726701 Phaseolus vulgaris
Phvul.004G023500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 2724702-2726701 Phaseolus vulgaris
Phvul.004G023500 2.0kb downstream 2.0kb downstream 11825 true Chr04: 2712877-2724701 Phaseolus vulgaris
Phvul.004G023500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 2712877-2714876 Phaseolus vulgaris
Phvul.004G023500 5.0kb upstream 5.0kb upstream 14825 true Chr04: 2714877-2729701 Phaseolus vulgaris
Phvul.004G023500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 2724702-2729701 Phaseolus vulgaris
Phvul.004G023500 5.0kb downstream 5.0kb downstream 14825 true Chr04: 2709877-2724701 Phaseolus vulgaris
Phvul.004G023500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 2709877-2714876 Phaseolus vulgaris
Phvul.004G023500 10.0kb upstream 10.0kb upstream 19825 true Chr04: 2714877-2734701 Phaseolus vulgaris
Phvul.004G023500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 2724702-2734701 Phaseolus vulgaris
Phvul.004G023500 10.0kb downstream 10.0kb downstream 19825 true Chr04: 2704877-2724701 Phaseolus vulgaris
Phvul.004G023500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 2704877-2714876 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311449 5265 Fabidae View MSA
124069574 5270 Rosid View MSA
123741998 5271 Pentapetalae View MSA
122794429 5272 Eudicot View MSA
122048619 5273 Angiosperm View MSA
121347898 5274 Embryophyte View MSA
123424804 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.02065 0.0 14.0708   Low
cufflinks 7.48356 0.0 20.2855    
cufflinks 19.698 0.0 50.9185   High
cufflinks 8.5855 0.0 23.1244    
cufflinks 10.121 0.0 26.8948    
cufflinks 7.09325 0.0 19.3113    
cufflinks 6.74698 0.0 18.4509    
cufflinks 13.8424 0.0 36.0031   High
cufflinks 5.80272 0.0 16.1232   Low
cufflinks 10.5532 0.0 27.9174    
cufflinks 8.64393 0.0 23.2453    

0 Strain