Gene : Phvul.004G022600 P. vulgaris v2.1
Defline:  (1 of 8) PF05542 - Protein of unknown function (DUF760) (DUF760) Genomic Order:  261
Name:  ? Phvul.004G022600 Secondary Identifier:  ? PAC:37162175
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G022600 0.5kb upstream 0.5kb upstream 4488 true Chr04: 2587200-2591687 Phaseolus vulgaris
Phvul.004G022600 0.5kb upstream 0.5kb upstream 500 false Chr04: 2587200-2587699 Phaseolus vulgaris
Phvul.004G022600 0.5kb downstream 0.5kb downstream 4488 true Chr04: 2587700-2592187 Phaseolus vulgaris
Phvul.004G022600 0.5kb downstream 0.5kb downstream 500 false Chr04: 2591688-2592187 Phaseolus vulgaris
Phvul.004G022600 1.0kb upstream 1.0kb upstream 4988 true Chr04: 2586700-2591687 Phaseolus vulgaris
Phvul.004G022600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 2586700-2587699 Phaseolus vulgaris
Phvul.004G022600 1.0kb downstream 1.0kb downstream 4988 true Chr04: 2587700-2592687 Phaseolus vulgaris
Phvul.004G022600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 2591688-2592687 Phaseolus vulgaris
Phvul.004G022600 2.0kb upstream 2.0kb upstream 5988 true Chr04: 2585700-2591687 Phaseolus vulgaris
Phvul.004G022600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 2585700-2587699 Phaseolus vulgaris
Phvul.004G022600 2.0kb downstream 2.0kb downstream 5988 true Chr04: 2587700-2593687 Phaseolus vulgaris
Phvul.004G022600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 2591688-2593687 Phaseolus vulgaris
Phvul.004G022600 5.0kb upstream 5.0kb upstream 8988 true Chr04: 2582700-2591687 Phaseolus vulgaris
Phvul.004G022600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 2582700-2587699 Phaseolus vulgaris
Phvul.004G022600 5.0kb downstream 5.0kb downstream 8988 true Chr04: 2587700-2596687 Phaseolus vulgaris
Phvul.004G022600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 2591688-2596687 Phaseolus vulgaris
Phvul.004G022600 10.0kb upstream 10.0kb upstream 13988 true Chr04: 2577700-2591687 Phaseolus vulgaris
Phvul.004G022600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 2577700-2587699 Phaseolus vulgaris
Phvul.004G022600 10.0kb downstream 10.0kb downstream 13988 true Chr04: 2587700-2601687 Phaseolus vulgaris
Phvul.004G022600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 2591688-2601687 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307743 5265 Fabidae View MSA
124068808 5270 Rosid View MSA
123749581 5271 Pentapetalae View MSA
122787342 5272 Eudicot View MSA
122046026 5273 Angiosperm View MSA
121350732 5274 Embryophyte View MSA
123426159 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 103.876 0.0 288.086 High High
cufflinks 32.5115 0.0 84.0411    
cufflinks 131.317 0.0 372.053 High High
cufflinks 36.9192 0.0 95.5535 High  
cufflinks 29.1475 0.0 75.3428    
cufflinks 48.7763 0.0 127.184 High  
cufflinks 14.2438 0.0 37.747   Low
cufflinks 13.863 0.0 36.8962   Low
cufflinks 12.5591 0.0 33.6717   Low
cufflinks 64.57 0.0 171.165 High  
cufflinks 34.9025 0.0 90.2883 High  

0 Strain