Gene : Phvul.004G024900 P. vulgaris v2.1
Defline:  (1 of 3) PTHR23070:SF44 - AAA-TYPE ATPASE FAMILY PROTEIN-RELATED Genomic Order:  285
Name:  ? Phvul.004G024900 Secondary Identifier:  ? PAC:37162681
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G024900 0.5kb upstream 0.5kb upstream 2499 true Chr04: 2810320-2812818 Phaseolus vulgaris
Phvul.004G024900 0.5kb upstream 0.5kb upstream 500 false Chr04: 2810320-2810819 Phaseolus vulgaris
Phvul.004G024900 0.5kb downstream 0.5kb downstream 2499 true Chr04: 2810820-2813318 Phaseolus vulgaris
Phvul.004G024900 0.5kb downstream 0.5kb downstream 500 false Chr04: 2812819-2813318 Phaseolus vulgaris
Phvul.004G024900 1.0kb upstream 1.0kb upstream 2999 true Chr04: 2809820-2812818 Phaseolus vulgaris
Phvul.004G024900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 2809820-2810819 Phaseolus vulgaris
Phvul.004G024900 1.0kb downstream 1.0kb downstream 2999 true Chr04: 2810820-2813818 Phaseolus vulgaris
Phvul.004G024900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 2812819-2813818 Phaseolus vulgaris
Phvul.004G024900 2.0kb upstream 2.0kb upstream 3999 true Chr04: 2808820-2812818 Phaseolus vulgaris
Phvul.004G024900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 2808820-2810819 Phaseolus vulgaris
Phvul.004G024900 2.0kb downstream 2.0kb downstream 3999 true Chr04: 2810820-2814818 Phaseolus vulgaris
Phvul.004G024900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 2812819-2814818 Phaseolus vulgaris
Phvul.004G024900 5.0kb upstream 5.0kb upstream 6999 true Chr04: 2805820-2812818 Phaseolus vulgaris
Phvul.004G024900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 2805820-2810819 Phaseolus vulgaris
Phvul.004G024900 5.0kb downstream 5.0kb downstream 6999 true Chr04: 2810820-2817818 Phaseolus vulgaris
Phvul.004G024900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 2812819-2817818 Phaseolus vulgaris
Phvul.004G024900 10.0kb upstream 10.0kb upstream 11999 true Chr04: 2800820-2812818 Phaseolus vulgaris
Phvul.004G024900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 2800820-2810819 Phaseolus vulgaris
Phvul.004G024900 10.0kb downstream 10.0kb downstream 11999 true Chr04: 2810820-2822818 Phaseolus vulgaris
Phvul.004G024900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 2812819-2822818 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122794526 5272 Eudicot View MSA
122306441 5265 Fabidae View MSA
124072543 5270 Rosid View MSA
123751074 5271 Pentapetalae View MSA
122051618 5273 Angiosperm View MSA
121350294 5274 Embryophyte View MSA
123428466 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.64741 0.0 15.6293    
cufflinks 3.28519 0.0 9.57307    
cufflinks 1.79819 0.0 5.58228   Low
cufflinks 2.5925 0.0 7.86358    
cufflinks 2.03374 0.0 6.34096   Low
cufflinks 3.22498 0.0 9.39654    
cufflinks 19.5151 0.0 50.4436   High
cufflinks 12.7514 0.0 33.1654   High
cufflinks 5.2188 0.0 14.4923    
cufflinks 18.883 0.0 48.8245   High
cufflinks 3.00498 0.0 8.89286    

0 Strain