Gene : Phvul.004G025000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23070//PTHR23070:SF19 - BCS1 AAA-TYPE ATPASE // SUBFAMILY NOT NAMED Genomic Order:  286
Name:  ? Phvul.004G025000 Secondary Identifier:  ? PAC:37162472
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G025000 0.5kb upstream 0.5kb upstream 2118 true Chr04: 2814579-2816696 Phaseolus vulgaris
Phvul.004G025000 0.5kb upstream 0.5kb upstream 500 false Chr04: 2814579-2815078 Phaseolus vulgaris
Phvul.004G025000 0.5kb downstream 0.5kb downstream 2118 true Chr04: 2815079-2817196 Phaseolus vulgaris
Phvul.004G025000 0.5kb downstream 0.5kb downstream 500 false Chr04: 2816697-2817196 Phaseolus vulgaris
Phvul.004G025000 1.0kb upstream 1.0kb upstream 2618 true Chr04: 2814079-2816696 Phaseolus vulgaris
Phvul.004G025000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 2814079-2815078 Phaseolus vulgaris
Phvul.004G025000 1.0kb downstream 1.0kb downstream 2618 true Chr04: 2815079-2817696 Phaseolus vulgaris
Phvul.004G025000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 2816697-2817696 Phaseolus vulgaris
Phvul.004G025000 2.0kb upstream 2.0kb upstream 3618 true Chr04: 2813079-2816696 Phaseolus vulgaris
Phvul.004G025000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 2813079-2815078 Phaseolus vulgaris
Phvul.004G025000 2.0kb downstream 2.0kb downstream 3618 true Chr04: 2815079-2818696 Phaseolus vulgaris
Phvul.004G025000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 2816697-2818696 Phaseolus vulgaris
Phvul.004G025000 5.0kb upstream 5.0kb upstream 6618 true Chr04: 2810079-2816696 Phaseolus vulgaris
Phvul.004G025000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 2810079-2815078 Phaseolus vulgaris
Phvul.004G025000 5.0kb downstream 5.0kb downstream 6618 true Chr04: 2815079-2821696 Phaseolus vulgaris
Phvul.004G025000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 2816697-2821696 Phaseolus vulgaris
Phvul.004G025000 10.0kb upstream 10.0kb upstream 11618 true Chr04: 2805079-2816696 Phaseolus vulgaris
Phvul.004G025000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 2805079-2815078 Phaseolus vulgaris
Phvul.004G025000 10.0kb downstream 10.0kb downstream 11618 true Chr04: 2815079-2826696 Phaseolus vulgaris
Phvul.004G025000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 2816697-2826696 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122794526 5272 Eudicot View MSA
122301938 5265 Fabidae View MSA
124072543 5270 Rosid View MSA
123751074 5271 Pentapetalae View MSA
122051618 5273 Angiosperm View MSA
121350294 5274 Embryophyte View MSA
123428466 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.07183 0.0 9.21857    
cufflinks 2.34024 0.0 10.1174    
cufflinks 14.2557 0.0 47.1416   High
cufflinks 0.526381 0.0 2.47236 Low Low
cufflinks 3.96953 0.0 15.3719    
cufflinks 0.363363 0.0 1.70188 Low Low
cufflinks 1.20479 0.0 6.21278    
cufflinks 2.57571 0.0 10.7697    
cufflinks 4.31778 0.0 18.178    
cufflinks 5.01711 0.0 20.7467    
cufflinks 1.20328 0.0 6.69248    

0 Strain