Gene : Phvul.004G027000 P. vulgaris v2.1
Defline:  (1 of 4) 5.1.3.3 - Aldose 1-epimerase / Mutarotase Genomic Order:  306
Name:  ? Phvul.004G027000 Secondary Identifier:  ? PAC:37163150
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY66-422 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G027000 0.5kb upstream 0.5kb upstream 3667 true Chr04: 3019371-3023037 Phaseolus vulgaris
Phvul.004G027000 0.5kb upstream 0.5kb upstream 500 false Chr04: 3019371-3019870 Phaseolus vulgaris
Phvul.004G027000 0.5kb downstream 0.5kb downstream 3667 true Chr04: 3019871-3023537 Phaseolus vulgaris
Phvul.004G027000 0.5kb downstream 0.5kb downstream 500 false Chr04: 3023038-3023537 Phaseolus vulgaris
Phvul.004G027000 1.0kb upstream 1.0kb upstream 4167 true Chr04: 3018871-3023037 Phaseolus vulgaris
Phvul.004G027000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 3018871-3019870 Phaseolus vulgaris
Phvul.004G027000 1.0kb downstream 1.0kb downstream 4167 true Chr04: 3019871-3024037 Phaseolus vulgaris
Phvul.004G027000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 3023038-3024037 Phaseolus vulgaris
Phvul.004G027000 2.0kb upstream 2.0kb upstream 5167 true Chr04: 3017871-3023037 Phaseolus vulgaris
Phvul.004G027000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 3017871-3019870 Phaseolus vulgaris
Phvul.004G027000 2.0kb downstream 2.0kb downstream 5167 true Chr04: 3019871-3025037 Phaseolus vulgaris
Phvul.004G027000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 3023038-3025037 Phaseolus vulgaris
Phvul.004G027000 5.0kb upstream 5.0kb upstream 8167 true Chr04: 3014871-3023037 Phaseolus vulgaris
Phvul.004G027000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 3014871-3019870 Phaseolus vulgaris
Phvul.004G027000 5.0kb downstream 5.0kb downstream 8167 true Chr04: 3019871-3028037 Phaseolus vulgaris
Phvul.004G027000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 3023038-3028037 Phaseolus vulgaris
Phvul.004G027000 10.0kb upstream 10.0kb upstream 13167 true Chr04: 3009871-3023037 Phaseolus vulgaris
Phvul.004G027000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 3009871-3019870 Phaseolus vulgaris
Phvul.004G027000 10.0kb downstream 10.0kb downstream 13167 true Chr04: 3019871-3033037 Phaseolus vulgaris
Phvul.004G027000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 3023038-3033037 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297707 5265 Fabidae View MSA
124036122 5270 Rosid View MSA
123744295 5271 Pentapetalae View MSA
122796241 5272 Eudicot View MSA
122044460 5273 Angiosperm View MSA
121310296 5274 Embryophyte View MSA
123425845 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.43502 0.0 10.6442    
cufflinks 0.873534 0.0 3.14919    
cufflinks 1.47022 0.0 4.99968    
cufflinks 2.54861 0.0 8.26208    
cufflinks 2.49878 0.0 8.10673    
cufflinks 0.492756 0.0 1.86337 Low Low
cufflinks 7.76487 0.0 21.9774   High
cufflinks 7.26471 0.0 20.6236    
cufflinks 20.5956 0.0 54.0181   High
cufflinks 0.693686 0.0 2.55922   Low
cufflinks 1.85851 0.0 6.22541    

0 Strain