Gene : Phvul.004G012100 P. vulgaris v2.1
Defline:  (1 of 2) PTHR22981//PTHR22981:SF77 - 3-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  207
Name:  ? Phvul.004G012100 Secondary Identifier:  ? PAC:37161850
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G012100 0.5kb upstream 0.5kb upstream 5082 true Chr04: 2029014-2034095 Phaseolus vulgaris
Phvul.004G012100 0.5kb upstream 0.5kb upstream 500 false Chr04: 2029014-2029513 Phaseolus vulgaris
Phvul.004G012100 0.5kb downstream 0.5kb downstream 5082 true Chr04: 2029514-2034595 Phaseolus vulgaris
Phvul.004G012100 0.5kb downstream 0.5kb downstream 500 false Chr04: 2034096-2034595 Phaseolus vulgaris
Phvul.004G012100 1.0kb upstream 1.0kb upstream 5582 true Chr04: 2028514-2034095 Phaseolus vulgaris
Phvul.004G012100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 2028514-2029513 Phaseolus vulgaris
Phvul.004G012100 1.0kb downstream 1.0kb downstream 5582 true Chr04: 2029514-2035095 Phaseolus vulgaris
Phvul.004G012100 1.0kb downstream 1.0kb downstream 1000 false Chr04: 2034096-2035095 Phaseolus vulgaris
Phvul.004G012100 2.0kb upstream 2.0kb upstream 6582 true Chr04: 2027514-2034095 Phaseolus vulgaris
Phvul.004G012100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 2027514-2029513 Phaseolus vulgaris
Phvul.004G012100 2.0kb downstream 2.0kb downstream 6582 true Chr04: 2029514-2036095 Phaseolus vulgaris
Phvul.004G012100 2.0kb downstream 2.0kb downstream 2000 false Chr04: 2034096-2036095 Phaseolus vulgaris
Phvul.004G012100 5.0kb upstream 5.0kb upstream 9582 true Chr04: 2024514-2034095 Phaseolus vulgaris
Phvul.004G012100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 2024514-2029513 Phaseolus vulgaris
Phvul.004G012100 5.0kb downstream 5.0kb downstream 9582 true Chr04: 2029514-2039095 Phaseolus vulgaris
Phvul.004G012100 5.0kb downstream 5.0kb downstream 5000 false Chr04: 2034096-2039095 Phaseolus vulgaris
Phvul.004G012100 10.0kb upstream 10.0kb upstream 14582 true Chr04: 2019514-2034095 Phaseolus vulgaris
Phvul.004G012100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 2019514-2029513 Phaseolus vulgaris
Phvul.004G012100 10.0kb downstream 10.0kb downstream 14582 true Chr04: 2029514-2044095 Phaseolus vulgaris
Phvul.004G012100 10.0kb downstream 10.0kb downstream 10000 false Chr04: 2034096-2044095 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303894 5265 Fabidae View MSA
124072008 5270 Rosid View MSA
123749922 5271 Pentapetalae View MSA
122795074 5272 Eudicot View MSA
122049561 5273 Angiosperm View MSA
121311475 5274 Embryophyte View MSA
123348768 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.915621 0.0 2.745   Low
cufflinks 9.05855 0.0 23.4671   High
cufflinks 3.28171 0.0 8.72366    
cufflinks 1.48821 0.0 4.31422   Low
cufflinks 4.36456 0.0 11.4664    
cufflinks 8.68188 0.0 22.479   High
cufflinks 3.12468 0.0 8.31985    
cufflinks 5.47383 0.0 14.1814    
cufflinks 3.53879 0.0 9.36527    
cufflinks 7.51474 0.0 19.4243    
cufflinks 4.1144 0.0 10.8139    

0 Strain