Gene : Phvul.004G013600 P. vulgaris v2.1
Defline:  (1 of 1) PTHR22939:SF81 - PROTEASE DO-LIKE 1, CHLOROPLASTIC Genomic Order:  156
Name:  ? Phvul.004G013600 Secondary Identifier:  ? PAC:37163114
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G013600 0.5kb upstream 0.5kb upstream 6693 true Chr04: 1541722-1548414 Phaseolus vulgaris
Phvul.004G013600 0.5kb upstream 0.5kb upstream 500 false Chr04: 1547915-1548414 Phaseolus vulgaris
Phvul.004G013600 0.5kb downstream 0.5kb downstream 6693 true Chr04: 1541222-1547914 Phaseolus vulgaris
Phvul.004G013600 0.5kb downstream 0.5kb downstream 500 false Chr04: 1541222-1541721 Phaseolus vulgaris
Phvul.004G013600 1.0kb upstream 1.0kb upstream 7193 true Chr04: 1541722-1548914 Phaseolus vulgaris
Phvul.004G013600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 1547915-1548914 Phaseolus vulgaris
Phvul.004G013600 1.0kb downstream 1.0kb downstream 7193 true Chr04: 1540722-1547914 Phaseolus vulgaris
Phvul.004G013600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 1540722-1541721 Phaseolus vulgaris
Phvul.004G013600 2.0kb upstream 2.0kb upstream 8193 true Chr04: 1541722-1549914 Phaseolus vulgaris
Phvul.004G013600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 1547915-1549914 Phaseolus vulgaris
Phvul.004G013600 2.0kb downstream 2.0kb downstream 8193 true Chr04: 1539722-1547914 Phaseolus vulgaris
Phvul.004G013600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 1539722-1541721 Phaseolus vulgaris
Phvul.004G013600 5.0kb upstream 5.0kb upstream 11193 true Chr04: 1541722-1552914 Phaseolus vulgaris
Phvul.004G013600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 1547915-1552914 Phaseolus vulgaris
Phvul.004G013600 5.0kb downstream 5.0kb downstream 11193 true Chr04: 1536722-1547914 Phaseolus vulgaris
Phvul.004G013600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 1536722-1541721 Phaseolus vulgaris
Phvul.004G013600 10.0kb upstream 10.0kb upstream 16193 true Chr04: 1541722-1557914 Phaseolus vulgaris
Phvul.004G013600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 1547915-1557914 Phaseolus vulgaris
Phvul.004G013600 10.0kb downstream 10.0kb downstream 16193 true Chr04: 1531722-1547914 Phaseolus vulgaris
Phvul.004G013600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 1531722-1541721 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304146 5265 Fabidae View MSA
124067887 5270 Rosid View MSA
123737720 5271 Pentapetalae View MSA
122794444 5272 Eudicot View MSA
122046956 5273 Angiosperm View MSA
121350502 5274 Embryophyte View MSA
123427247 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.1968 0.0 60.028    
cufflinks 15.8188 0.0 41.4892    
cufflinks 57.3456 0.0 152.054 High High
cufflinks 19.3033 0.0 50.211    
cufflinks 23.3229 0.0 60.3813    
cufflinks 34.6547 0.0 89.767 High  
cufflinks 9.57472 0.0 26.0215   Low
cufflinks 7.40441 0.0 20.5889   Low
cufflinks 8.02594 0.0 22.2002   Low
cufflinks 26.8731 0.0 69.4668    
cufflinks 21.4181 0.0 55.5535    

0 Strain