Gene : Phvul.004G012500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10366:SF388 - CINNAMOYL COA REDUCTASE-LIKE PROTEIN Genomic Order:  144
Name:  ? Phvul.004G012500 Secondary Identifier:  ? PAC:37163411
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-361 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G012500 0.5kb upstream 0.5kb upstream 5275 true Chr04: 1370763-1376037 Phaseolus vulgaris
Phvul.004G012500 0.5kb upstream 0.5kb upstream 500 false Chr04: 1375538-1376037 Phaseolus vulgaris
Phvul.004G012500 0.5kb downstream 0.5kb downstream 5275 true Chr04: 1370263-1375537 Phaseolus vulgaris
Phvul.004G012500 0.5kb downstream 0.5kb downstream 500 false Chr04: 1370263-1370762 Phaseolus vulgaris
Phvul.004G012500 1.0kb upstream 1.0kb upstream 5775 true Chr04: 1370763-1376537 Phaseolus vulgaris
Phvul.004G012500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 1375538-1376537 Phaseolus vulgaris
Phvul.004G012500 1.0kb downstream 1.0kb downstream 5775 true Chr04: 1369763-1375537 Phaseolus vulgaris
Phvul.004G012500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 1369763-1370762 Phaseolus vulgaris
Phvul.004G012500 2.0kb upstream 2.0kb upstream 6775 true Chr04: 1370763-1377537 Phaseolus vulgaris
Phvul.004G012500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 1375538-1377537 Phaseolus vulgaris
Phvul.004G012500 2.0kb downstream 2.0kb downstream 6775 true Chr04: 1368763-1375537 Phaseolus vulgaris
Phvul.004G012500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 1368763-1370762 Phaseolus vulgaris
Phvul.004G012500 5.0kb upstream 5.0kb upstream 9775 true Chr04: 1370763-1380537 Phaseolus vulgaris
Phvul.004G012500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 1375538-1380537 Phaseolus vulgaris
Phvul.004G012500 5.0kb downstream 5.0kb downstream 9775 true Chr04: 1365763-1375537 Phaseolus vulgaris
Phvul.004G012500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 1365763-1370762 Phaseolus vulgaris
Phvul.004G012500 10.0kb upstream 10.0kb upstream 14775 true Chr04: 1370763-1385537 Phaseolus vulgaris
Phvul.004G012500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 1375538-1385537 Phaseolus vulgaris
Phvul.004G012500 10.0kb downstream 10.0kb downstream 14775 true Chr04: 1360763-1375537 Phaseolus vulgaris
Phvul.004G012500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 1360763-1370762 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307618 5265 Fabidae View MSA
124060434 5270 Rosid View MSA
123740788 5271 Pentapetalae View MSA
122786439 5272 Eudicot View MSA
122047901 5273 Angiosperm View MSA
121310812 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.2562 0.0 47.9101    
cufflinks 13.5134 0.0 36.2165    
cufflinks 4.07177 0.0 12.2149   Low
cufflinks 29.4169 0.0 76.1837   High
cufflinks 3.67912 0.0 11.2956   Low
cufflinks 11.3728 0.0 30.8912    
cufflinks 14.4421 0.0 38.4342    
cufflinks 17.725 0.0 46.491    
cufflinks 10.8602 0.0 29.5839    
cufflinks 4.93105 0.0 14.5507   Low
cufflinks 9.82927 0.0 27.133    

0 Strain