Gene : Phvul.004G014300 P. vulgaris v2.1
Defline:  (1 of 3) PTHR21068:SF5 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MIL23-RELATED Genomic Order:  163
Name:  ? Phvul.004G014300 Secondary Identifier:  ? PAC:37162062
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G014300 0.5kb upstream 0.5kb upstream 4407 true Chr04: 1596471-1600877 Phaseolus vulgaris
Phvul.004G014300 0.5kb upstream 0.5kb upstream 500 false Chr04: 1600378-1600877 Phaseolus vulgaris
Phvul.004G014300 0.5kb downstream 0.5kb downstream 4407 true Chr04: 1595971-1600377 Phaseolus vulgaris
Phvul.004G014300 0.5kb downstream 0.5kb downstream 500 false Chr04: 1595971-1596470 Phaseolus vulgaris
Phvul.004G014300 1.0kb upstream 1.0kb upstream 4907 true Chr04: 1596471-1601377 Phaseolus vulgaris
Phvul.004G014300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 1600378-1601377 Phaseolus vulgaris
Phvul.004G014300 1.0kb downstream 1.0kb downstream 4907 true Chr04: 1595471-1600377 Phaseolus vulgaris
Phvul.004G014300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 1595471-1596470 Phaseolus vulgaris
Phvul.004G014300 2.0kb upstream 2.0kb upstream 5907 true Chr04: 1596471-1602377 Phaseolus vulgaris
Phvul.004G014300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 1600378-1602377 Phaseolus vulgaris
Phvul.004G014300 2.0kb downstream 2.0kb downstream 5907 true Chr04: 1594471-1600377 Phaseolus vulgaris
Phvul.004G014300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 1594471-1596470 Phaseolus vulgaris
Phvul.004G014300 5.0kb upstream 5.0kb upstream 8907 true Chr04: 1596471-1605377 Phaseolus vulgaris
Phvul.004G014300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 1600378-1605377 Phaseolus vulgaris
Phvul.004G014300 5.0kb downstream 5.0kb downstream 8907 true Chr04: 1591471-1600377 Phaseolus vulgaris
Phvul.004G014300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 1591471-1596470 Phaseolus vulgaris
Phvul.004G014300 10.0kb upstream 10.0kb upstream 13907 true Chr04: 1596471-1610377 Phaseolus vulgaris
Phvul.004G014300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 1600378-1610377 Phaseolus vulgaris
Phvul.004G014300 10.0kb downstream 10.0kb downstream 13907 true Chr04: 1586471-1600377 Phaseolus vulgaris
Phvul.004G014300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 1586471-1596470 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026413 5273 Angiosperm View MSA
122296763 5265 Fabidae View MSA
124035773 5270 Rosid View MSA
123740247 5271 Pentapetalae View MSA
122787553 5272 Eudicot View MSA
121296318 5274 Embryophyte View MSA
123334500 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.05251 0.0 5.8858   Low
cufflinks 2.22466 0.0 10.1963    
cufflinks 1.13987 0.0 4.80281   Low
cufflinks 2.14393 0.0 10.0144    
cufflinks 3.89847 0.0 16.088   High
cufflinks 2.3304 0.0 10.7925    
cufflinks 2.64986 0.0 11.5435    
cufflinks 2.06062 0.0 7.21434    
cufflinks 1.68904 0.0 6.14095    
cufflinks 2.55935 0.0 11.5676    
cufflinks 5.71121 0.0 24.0612   High

0 Strain