Gene : Phvul.004G018600 P. vulgaris v2.1
Defline:  (1 of 74) PF00892 - EamA-like transporter family (EamA) Genomic Order:  223
Name:  ? Phvul.004G018600 Secondary Identifier:  ? PAC:37163025
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G018600 0.5kb upstream 0.5kb upstream 3979 true Chr04: 2202532-2206510 Phaseolus vulgaris
Phvul.004G018600 0.5kb upstream 0.5kb upstream 500 false Chr04: 2202532-2203031 Phaseolus vulgaris
Phvul.004G018600 0.5kb downstream 0.5kb downstream 3979 true Chr04: 2203032-2207010 Phaseolus vulgaris
Phvul.004G018600 0.5kb downstream 0.5kb downstream 500 false Chr04: 2206511-2207010 Phaseolus vulgaris
Phvul.004G018600 1.0kb upstream 1.0kb upstream 4479 true Chr04: 2202032-2206510 Phaseolus vulgaris
Phvul.004G018600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 2202032-2203031 Phaseolus vulgaris
Phvul.004G018600 1.0kb downstream 1.0kb downstream 4479 true Chr04: 2203032-2207510 Phaseolus vulgaris
Phvul.004G018600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 2206511-2207510 Phaseolus vulgaris
Phvul.004G018600 2.0kb upstream 2.0kb upstream 5479 true Chr04: 2201032-2206510 Phaseolus vulgaris
Phvul.004G018600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 2201032-2203031 Phaseolus vulgaris
Phvul.004G018600 2.0kb downstream 2.0kb downstream 5479 true Chr04: 2203032-2208510 Phaseolus vulgaris
Phvul.004G018600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 2206511-2208510 Phaseolus vulgaris
Phvul.004G018600 5.0kb upstream 5.0kb upstream 8479 true Chr04: 2198032-2206510 Phaseolus vulgaris
Phvul.004G018600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 2198032-2203031 Phaseolus vulgaris
Phvul.004G018600 5.0kb downstream 5.0kb downstream 8479 true Chr04: 2203032-2211510 Phaseolus vulgaris
Phvul.004G018600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 2206511-2211510 Phaseolus vulgaris
Phvul.004G018600 10.0kb upstream 10.0kb upstream 13479 true Chr04: 2193032-2206510 Phaseolus vulgaris
Phvul.004G018600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 2193032-2203031 Phaseolus vulgaris
Phvul.004G018600 10.0kb downstream 10.0kb downstream 13479 true Chr04: 2203032-2216510 Phaseolus vulgaris
Phvul.004G018600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 2206511-2216510 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309463 5265 Fabidae View MSA
124073140 5270 Rosid View MSA
123752640 5271 Pentapetalae View MSA
122797253 5272 Eudicot View MSA
122050761 5273 Angiosperm View MSA
121312106 5274 Embryophyte View MSA
123349308 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.13212 0.0 15.0969    
cufflinks 1.00423 0.0 3.55113   Low
cufflinks 0.653253 0.0 2.39573   Low
cufflinks 1.69706 0.0 5.7177    
cufflinks 9.23404 0.0 25.816    
cufflinks 0.910074 0.0 3.2489   Low
cufflinks 24.3077 0.0 63.2073   High
cufflinks 15.5122 0.0 41.1295   High
cufflinks 27.1599 0.0 70.4544   High
cufflinks 3.87277 0.0 11.7853    
cufflinks 2.74619 0.0 8.75475    

0 Strain