Gene : Phvul.004G016900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23257//PTHR23257:SF511 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED Genomic Order:  191
Name:  ? Phvul.004G016900 Secondary Identifier:  ? PAC:37163735
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G016900 0.5kb upstream 0.5kb upstream 5385 true Chr04: 1848212-1853596 Phaseolus vulgaris
Phvul.004G016900 0.5kb upstream 0.5kb upstream 500 false Chr04: 1848212-1848711 Phaseolus vulgaris
Phvul.004G016900 0.5kb downstream 0.5kb downstream 5385 true Chr04: 1848712-1854096 Phaseolus vulgaris
Phvul.004G016900 0.5kb downstream 0.5kb downstream 500 false Chr04: 1853597-1854096 Phaseolus vulgaris
Phvul.004G016900 1.0kb upstream 1.0kb upstream 5885 true Chr04: 1847712-1853596 Phaseolus vulgaris
Phvul.004G016900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 1847712-1848711 Phaseolus vulgaris
Phvul.004G016900 1.0kb downstream 1.0kb downstream 5885 true Chr04: 1848712-1854596 Phaseolus vulgaris
Phvul.004G016900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 1853597-1854596 Phaseolus vulgaris
Phvul.004G016900 2.0kb upstream 2.0kb upstream 6885 true Chr04: 1846712-1853596 Phaseolus vulgaris
Phvul.004G016900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 1846712-1848711 Phaseolus vulgaris
Phvul.004G016900 2.0kb downstream 2.0kb downstream 6885 true Chr04: 1848712-1855596 Phaseolus vulgaris
Phvul.004G016900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 1853597-1855596 Phaseolus vulgaris
Phvul.004G016900 5.0kb upstream 5.0kb upstream 9885 true Chr04: 1843712-1853596 Phaseolus vulgaris
Phvul.004G016900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 1843712-1848711 Phaseolus vulgaris
Phvul.004G016900 5.0kb downstream 5.0kb downstream 9885 true Chr04: 1848712-1858596 Phaseolus vulgaris
Phvul.004G016900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 1853597-1858596 Phaseolus vulgaris
Phvul.004G016900 10.0kb upstream 10.0kb upstream 14885 true Chr04: 1838712-1853596 Phaseolus vulgaris
Phvul.004G016900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 1838712-1848711 Phaseolus vulgaris
Phvul.004G016900 10.0kb downstream 10.0kb downstream 14885 true Chr04: 1848712-1863596 Phaseolus vulgaris
Phvul.004G016900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 1853597-1863596 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304545 5265 Fabidae View MSA
124069596 5270 Rosid View MSA
123751739 5271 Pentapetalae View MSA
122795785 5272 Eudicot View MSA
122041918 5273 Angiosperm View MSA
121348422 5274 Embryophyte View MSA
123380860 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.27706 0.0 21.8638   Low
cufflinks 17.8702 0.0 46.2187    
cufflinks 18.1276 0.0 46.9054    
cufflinks 15.4093 0.0 39.8668    
cufflinks 20.1248 0.0 52.0714    
cufflinks 14.6612 0.0 37.9043    
cufflinks 17.745 0.0 45.9295    
cufflinks 23.201 0.0 60.539   High
cufflinks 11.6291 0.0 30.155   Low
cufflinks 21.6201 0.0 56.0467    
cufflinks 22.421 0.0 58.2073    

0 Strain