Gene : Phvul.004G017700 P. vulgaris v2.1
Defline:  (1 of 3) PTHR14155//PTHR14155:SF103 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Genomic Order:  214
Name:  ? Phvul.004G017700 Secondary Identifier:  ? PAC:37162968
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G017700 0.5kb upstream 0.5kb upstream 1562 true Chr04: 2130447-2132008 Phaseolus vulgaris
Phvul.004G017700 0.5kb upstream 0.5kb upstream 500 false Chr04: 2130447-2130946 Phaseolus vulgaris
Phvul.004G017700 0.5kb downstream 0.5kb downstream 1562 true Chr04: 2130947-2132508 Phaseolus vulgaris
Phvul.004G017700 0.5kb downstream 0.5kb downstream 500 false Chr04: 2132009-2132508 Phaseolus vulgaris
Phvul.004G017700 1.0kb upstream 1.0kb upstream 2062 true Chr04: 2129947-2132008 Phaseolus vulgaris
Phvul.004G017700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 2129947-2130946 Phaseolus vulgaris
Phvul.004G017700 1.0kb downstream 1.0kb downstream 2062 true Chr04: 2130947-2133008 Phaseolus vulgaris
Phvul.004G017700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 2132009-2133008 Phaseolus vulgaris
Phvul.004G017700 2.0kb upstream 2.0kb upstream 3062 true Chr04: 2128947-2132008 Phaseolus vulgaris
Phvul.004G017700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 2128947-2130946 Phaseolus vulgaris
Phvul.004G017700 2.0kb downstream 2.0kb downstream 3062 true Chr04: 2130947-2134008 Phaseolus vulgaris
Phvul.004G017700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 2132009-2134008 Phaseolus vulgaris
Phvul.004G017700 5.0kb upstream 5.0kb upstream 6062 true Chr04: 2125947-2132008 Phaseolus vulgaris
Phvul.004G017700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 2125947-2130946 Phaseolus vulgaris
Phvul.004G017700 5.0kb downstream 5.0kb downstream 6062 true Chr04: 2130947-2137008 Phaseolus vulgaris
Phvul.004G017700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 2132009-2137008 Phaseolus vulgaris
Phvul.004G017700 10.0kb upstream 10.0kb upstream 11062 true Chr04: 2120947-2132008 Phaseolus vulgaris
Phvul.004G017700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 2120947-2130946 Phaseolus vulgaris
Phvul.004G017700 10.0kb downstream 10.0kb downstream 11062 true Chr04: 2130947-2142008 Phaseolus vulgaris
Phvul.004G017700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 2132009-2142008 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310591 5265 Fabidae View MSA
124074887 5270 Rosid View MSA
123753111 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.191318 0.0 0.806195 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.478225 0.0 1.88807 Low  
cufflinks 0.148411 0.0 0.645612 Low  
cufflinks 3.97592 0.0 18.0457   High
cufflinks 4.13132 0.0 18.1195   High
cufflinks 5.93897 0.0 24.4014   High
cufflinks 0.0223381 0.0 0.158957 Low Low
cufflinks 0.0814019 0.0 0.382785 Low  

0 Strain