Gene : Phvul.004G004700 P. vulgaris v2.1
Defline:  (1 of 1) K16190 - glucuronokinase (GLCAK) Genomic Order:  42
Name:  ? Phvul.004G004700 Secondary Identifier:  ? PAC:37161743
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-4841 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G004700 0.5kb upstream 0.5kb upstream 3033 true Chr04: 264422-267454 Phaseolus vulgaris
Phvul.004G004700 0.5kb upstream 0.5kb upstream 500 false Chr04: 266955-267454 Phaseolus vulgaris
Phvul.004G004700 0.5kb downstream 0.5kb downstream 3033 true Chr04: 263922-266954 Phaseolus vulgaris
Phvul.004G004700 0.5kb downstream 0.5kb downstream 500 false Chr04: 263922-264421 Phaseolus vulgaris
Phvul.004G004700 1.0kb upstream 1.0kb upstream 3533 true Chr04: 264422-267954 Phaseolus vulgaris
Phvul.004G004700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 266955-267954 Phaseolus vulgaris
Phvul.004G004700 1.0kb downstream 1.0kb downstream 3533 true Chr04: 263422-266954 Phaseolus vulgaris
Phvul.004G004700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 263422-264421 Phaseolus vulgaris
Phvul.004G004700 2.0kb upstream 2.0kb upstream 4533 true Chr04: 264422-268954 Phaseolus vulgaris
Phvul.004G004700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 266955-268954 Phaseolus vulgaris
Phvul.004G004700 2.0kb downstream 2.0kb downstream 4533 true Chr04: 262422-266954 Phaseolus vulgaris
Phvul.004G004700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 262422-264421 Phaseolus vulgaris
Phvul.004G004700 5.0kb upstream 5.0kb upstream 7533 true Chr04: 264422-271954 Phaseolus vulgaris
Phvul.004G004700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 266955-271954 Phaseolus vulgaris
Phvul.004G004700 5.0kb downstream 5.0kb downstream 7533 true Chr04: 259422-266954 Phaseolus vulgaris
Phvul.004G004700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 259422-264421 Phaseolus vulgaris
Phvul.004G004700 10.0kb upstream 10.0kb upstream 12533 true Chr04: 264422-276954 Phaseolus vulgaris
Phvul.004G004700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 266955-276954 Phaseolus vulgaris
Phvul.004G004700 10.0kb downstream 10.0kb downstream 12533 true Chr04: 254422-266954 Phaseolus vulgaris
Phvul.004G004700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 254422-264421 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306555 5265 Fabidae View MSA
124064106 5270 Rosid View MSA
123739248 5271 Pentapetalae View MSA
122786002 5272 Eudicot View MSA
122043026 5273 Angiosperm View MSA
121345002 5274 Embryophyte View MSA
123424752 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 48.6705 0.0 126.143 High High
cufflinks 11.093 0.0 30.641    
cufflinks 5.71946 0.0 16.9222   Low
cufflinks 37.1589 0.0 96.0502 High  
cufflinks 27.0552 0.0 70.3607    
cufflinks 2.12546 0.0 7.02366   Low
cufflinks 12.1265 0.0 33.1695    
cufflinks 12.2734 0.0 33.5866    
cufflinks 30.5052 0.0 79.0376 High  
cufflinks 31.1621 0.0 80.6944    
cufflinks 9.86942 0.0 27.5333    

0 Strain