Gene : Phvul.004G004600 P. vulgaris v2.1

Genomic Order:  41 Name:  ? Phvul.004G004600
Secondary Identifier:  ? PAC:37162162

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G004600 0.5kb upstream 0.5kb upstream 1688 true Chr04: 260491-262178 Phaseolus vulgaris
Phvul.004G004600 0.5kb upstream 0.5kb upstream 500 false Chr04: 260491-260990 Phaseolus vulgaris
Phvul.004G004600 0.5kb downstream 0.5kb downstream 1688 true Chr04: 260991-262678 Phaseolus vulgaris
Phvul.004G004600 0.5kb downstream 0.5kb downstream 500 false Chr04: 262179-262678 Phaseolus vulgaris
Phvul.004G004600 1.0kb upstream 1.0kb upstream 2188 true Chr04: 259991-262178 Phaseolus vulgaris
Phvul.004G004600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 259991-260990 Phaseolus vulgaris
Phvul.004G004600 1.0kb downstream 1.0kb downstream 2188 true Chr04: 260991-263178 Phaseolus vulgaris
Phvul.004G004600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 262179-263178 Phaseolus vulgaris
Phvul.004G004600 2.0kb upstream 2.0kb upstream 3188 true Chr04: 258991-262178 Phaseolus vulgaris
Phvul.004G004600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 258991-260990 Phaseolus vulgaris
Phvul.004G004600 2.0kb downstream 2.0kb downstream 3188 true Chr04: 260991-264178 Phaseolus vulgaris
Phvul.004G004600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 262179-264178 Phaseolus vulgaris
Phvul.004G004600 5.0kb upstream 5.0kb upstream 6188 true Chr04: 255991-262178 Phaseolus vulgaris
Phvul.004G004600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 255991-260990 Phaseolus vulgaris
Phvul.004G004600 5.0kb downstream 5.0kb downstream 6188 true Chr04: 260991-267178 Phaseolus vulgaris
Phvul.004G004600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 262179-267178 Phaseolus vulgaris
Phvul.004G004600 10.0kb upstream 10.0kb upstream 11188 true Chr04: 250991-262178 Phaseolus vulgaris
Phvul.004G004600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 250991-260990 Phaseolus vulgaris
Phvul.004G004600 10.0kb downstream 10.0kb downstream 11188 true Chr04: 260991-272178 Phaseolus vulgaris
Phvul.004G004600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 262179-272178 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304550 5265 Fabidae View MSA
124060553 5270 Rosid View MSA
123741817 5271 Pentapetalae View MSA
122786659 5272 Eudicot View MSA
122043183 5273 Angiosperm View MSA
121310085 5274 Embryophyte View MSA
123347672 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.98009 0.0 17.9998    
cufflinks 9.08478 0.0 26.146   High
cufflinks 2.95551 0.0 9.68531   Low
cufflinks 5.57858 0.0 16.9897    
cufflinks 6.28328 0.0 18.9185    
cufflinks 3.44216 0.0 11.051   Low
cufflinks 5.32802 0.0 16.1957    
cufflinks 4.5962 0.0 14.2126    
cufflinks 4.20225 0.0 13.1559    
cufflinks 3.84529 0.0 12.2165    
cufflinks 5.7615 0.0 17.4821    

0 Strain