Gene : Phvul.004G007000 P. vulgaris v2.1
Defline:  (1 of 30) PF02485 - Core-2/I-Branching enzyme (Branch) Genomic Order:  66
Name:  ? Phvul.004G007000 Secondary Identifier:  ? PAC:37163537
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G007000 0.5kb upstream 0.5kb upstream 6616 true Chr04: 509928-516543 Phaseolus vulgaris
Phvul.004G007000 0.5kb upstream 0.5kb upstream 500 false Chr04: 509928-510427 Phaseolus vulgaris
Phvul.004G007000 0.5kb downstream 0.5kb downstream 6616 true Chr04: 510428-517043 Phaseolus vulgaris
Phvul.004G007000 0.5kb downstream 0.5kb downstream 500 false Chr04: 516544-517043 Phaseolus vulgaris
Phvul.004G007000 1.0kb upstream 1.0kb upstream 7116 true Chr04: 509428-516543 Phaseolus vulgaris
Phvul.004G007000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 509428-510427 Phaseolus vulgaris
Phvul.004G007000 1.0kb downstream 1.0kb downstream 7116 true Chr04: 510428-517543 Phaseolus vulgaris
Phvul.004G007000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 516544-517543 Phaseolus vulgaris
Phvul.004G007000 2.0kb upstream 2.0kb upstream 8116 true Chr04: 508428-516543 Phaseolus vulgaris
Phvul.004G007000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 508428-510427 Phaseolus vulgaris
Phvul.004G007000 2.0kb downstream 2.0kb downstream 8116 true Chr04: 510428-518543 Phaseolus vulgaris
Phvul.004G007000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 516544-518543 Phaseolus vulgaris
Phvul.004G007000 5.0kb upstream 5.0kb upstream 11116 true Chr04: 505428-516543 Phaseolus vulgaris
Phvul.004G007000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 505428-510427 Phaseolus vulgaris
Phvul.004G007000 5.0kb downstream 5.0kb downstream 11116 true Chr04: 510428-521543 Phaseolus vulgaris
Phvul.004G007000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 516544-521543 Phaseolus vulgaris
Phvul.004G007000 10.0kb upstream 10.0kb upstream 16116 true Chr04: 500428-516543 Phaseolus vulgaris
Phvul.004G007000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 500428-510427 Phaseolus vulgaris
Phvul.004G007000 10.0kb downstream 10.0kb downstream 16116 true Chr04: 510428-526543 Phaseolus vulgaris
Phvul.004G007000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 516544-526543 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307563 5265 Fabidae View MSA
124066667 5270 Rosid View MSA
123753722 5271 Pentapetalae View MSA
122788010 5272 Eudicot View MSA
122051448 5273 Angiosperm View MSA
121351490 5274 Embryophyte View MSA
123428085 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.06618 0.0 25.0793    
cufflinks 7.17955 0.0 20.3124   Low
cufflinks 8.5384 0.0 23.7128    
cufflinks 12.4232 0.0 33.6773   High
cufflinks 9.09468 0.0 25.373    
cufflinks 6.53157 0.0 18.6281   Low
cufflinks 9.68931 0.0 26.6923    
cufflinks 9.42068 0.0 25.925    
cufflinks 9.14132 0.0 25.385    
cufflinks 15.7719 0.0 41.809   High
cufflinks 10.897 0.0 29.8484    

0 Strain