Gene : Phvul.004G009818 P. vulgaris v2.1
Defline:  (1 of 2) PF12530 - Protein of unknown function (DUF3730) (DUF3730) Genomic Order:  133
Name:  ? Phvul.004G009818 Secondary Identifier:  ? PAC:37163800
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G009818 0.5kb upstream 0.5kb upstream 12943 true Chr04: 1242823-1255765 Phaseolus vulgaris
Phvul.004G009818 0.5kb upstream 0.5kb upstream 500 false Chr04: 1255266-1255765 Phaseolus vulgaris
Phvul.004G009818 0.5kb downstream 0.5kb downstream 12943 true Chr04: 1242323-1255265 Phaseolus vulgaris
Phvul.004G009818 0.5kb downstream 0.5kb downstream 500 false Chr04: 1242323-1242822 Phaseolus vulgaris
Phvul.004G009818 1.0kb upstream 1.0kb upstream 13443 true Chr04: 1242823-1256265 Phaseolus vulgaris
Phvul.004G009818 1.0kb upstream 1.0kb upstream 1000 false Chr04: 1255266-1256265 Phaseolus vulgaris
Phvul.004G009818 1.0kb downstream 1.0kb downstream 13443 true Chr04: 1241823-1255265 Phaseolus vulgaris
Phvul.004G009818 1.0kb downstream 1.0kb downstream 1000 false Chr04: 1241823-1242822 Phaseolus vulgaris
Phvul.004G009818 2.0kb upstream 2.0kb upstream 14443 true Chr04: 1242823-1257265 Phaseolus vulgaris
Phvul.004G009818 2.0kb upstream 2.0kb upstream 2000 false Chr04: 1255266-1257265 Phaseolus vulgaris
Phvul.004G009818 2.0kb downstream 2.0kb downstream 14443 true Chr04: 1240823-1255265 Phaseolus vulgaris
Phvul.004G009818 2.0kb downstream 2.0kb downstream 2000 false Chr04: 1240823-1242822 Phaseolus vulgaris
Phvul.004G009818 5.0kb upstream 5.0kb upstream 17443 true Chr04: 1242823-1260265 Phaseolus vulgaris
Phvul.004G009818 5.0kb upstream 5.0kb upstream 5000 false Chr04: 1255266-1260265 Phaseolus vulgaris
Phvul.004G009818 5.0kb downstream 5.0kb downstream 17443 true Chr04: 1237823-1255265 Phaseolus vulgaris
Phvul.004G009818 5.0kb downstream 5.0kb downstream 5000 false Chr04: 1237823-1242822 Phaseolus vulgaris
Phvul.004G009818 10.0kb upstream 10.0kb upstream 22443 true Chr04: 1242823-1265265 Phaseolus vulgaris
Phvul.004G009818 10.0kb upstream 10.0kb upstream 10000 false Chr04: 1255266-1265265 Phaseolus vulgaris
Phvul.004G009818 10.0kb downstream 10.0kb downstream 22443 true Chr04: 1232823-1255265 Phaseolus vulgaris
Phvul.004G009818 10.0kb downstream 10.0kb downstream 10000 false Chr04: 1232823-1242822 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306112 5265 Fabidae View MSA
124073528 5270 Rosid View MSA
123737254 5271 Pentapetalae View MSA
122792826 5272 Eudicot View MSA
122044820 5273 Angiosperm View MSA
121344294 5274 Embryophyte View MSA
123424915 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.97377 0.0 6.59424   Low
cufflinks 4.92024 0.0 16.205    
cufflinks 5.01048 0.0 18.4901    
cufflinks 2.57814 0.0 8.29239   Low
cufflinks 5.39504 0.0 17.6416    
cufflinks 6.8921 0.0 24.6495    
cufflinks 5.47193 0.0 19.8041    
cufflinks 7.38036 0.0 23.9604   High
cufflinks 4.64076 0.0 17.591    
cufflinks 7.47677 0.0 26.4722   High
cufflinks 4.38059 0.0 14.758    

0 Strain